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Efficiently running DEXSeq for Large Cohorts
DEXSeq DEXSeq
updated 9.4 years ago by ▴ 10 • written 11.9 years ago by ▴ 320
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Comment: C: GenomicAlignments - Speeding up readGAlignmentPairs()
10.4 years ago Fong Chun Chan ▴ 320
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Comment: C: GenomicAlignments - Speeding up readGAlignmentPairs()
10.4 years ago Fong Chun Chan ▴ 320
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Comment: C: GenomicAlignments - Speeding up readGAlignmentPairs()
10.4 years ago Fong Chun Chan ▴ 320
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3.1k
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Answer: A: GenomicAlignments - Speeding up readGAlignmentPairs()
10.4 years ago Fong Chun Chan ▴ 320
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Comment: C: Using GenomicAlignments to get Exon-centric Counts
10.4 years ago Fong Chun Chan ▴ 320
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3
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Using GenomicAlignments to get Exon-centric Counts
updated 10.4 years ago by ★ 6.8k • written 10.4 years ago by ▴ 320
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GenomicAlignments - Speeding up readGAlignmentPairs()
GenomicFeatures GenomicFeatures
10.4 years ago Fong Chun Chan ▴ 320
8
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3
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6.5k
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Renaming the seqlevels in a transcript database from GenomicFeatures
GenomicFeatures GenomicFeatures
updated 10.4 years ago by ▴ 390 • written 10.4 years ago by ▴ 320
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2
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4.1k
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VariantAnnotation R Package - Merging Two VCF files
VariantAnnotation VariantAnnotation VariantAnnotation VariantAnnotation
written 10.8 years ago by ▴ 320
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Comment: C: VariantAnnotation - Accessing specific genomic ranges without needing a tabix fi
10.8 years ago Fong Chun Chan ▴ 320
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2
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1.5k
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VariantAnnotation - Accessing specific genomic ranges without needing a tabix file
updated 10.8 years ago by ★ 11k • written 10.8 years ago by ▴ 320
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1.5k
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Building a TranscriptDb object from a lncRNA gft file
TranscriptDb TranscriptDb
updated 11.8 years ago by ★ 7.2k • written 11.8 years ago by ▴ 320
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Comment: C: Detecting differential usage of introns from RNA-seq data.
11.8 years ago Fong Chun Chan ▴ 320
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Comment: C: Detecting differential usage of introns from RNA-seq data.
11.8 years ago Fong Chun Chan ▴ 320
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Comment: C: Detecting differential usage of introns from RNA-seq data.
11.8 years ago Fong Chun Chan ▴ 320
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7
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2.4k
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Detecting differential usage of introns from RNA-seq data.
DEXSeq DEXSeq
updated 11.8 years ago by ★ 1.9k • written 11.8 years ago by ▴ 320
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2.6k
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Comment: C: Getting Introns Expression at a Per Gene Level
11.8 years ago Fong Chun Chan ▴ 320
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4
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2.6k
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Getting Introns Expression at a Per Gene Level
Annotation Annotation
updated 11.8 years ago by ★ 6.8k • written 11.8 years ago by ▴ 320
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1.7k
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Comment: C: Getting DESEq results on just one gene
11.8 years ago Fong Chun Chan ▴ 320
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3
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1.7k
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Getting DESEq results on just one gene
DESeq DESeq
updated 11.8 years ago by ★ 13k • written 11.8 years ago by ▴ 320
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1
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902
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Getting Introns Expression at a Per Gene Level
updated 11.8 years ago by ★ 6.8k • written 11.8 years ago by ▴ 320
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3.4k
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Comment: C: Efficiently running DEXSeq for Large Cohorts
11.9 years ago Fong Chun Chan ▴ 320
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1
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3.4k
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Comment: C: Efficiently running DEXSeq for Large Cohorts
11.9 years ago Fong Chun Chan ▴ 320
0
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1
reply
3.4k
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Comment: C: Efficiently running DEXSeq for Large Cohorts
11.9 years ago Fong Chun Chan ▴ 320
0
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1
reply
3.4k
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Comment: C: Efficiently running DEXSeq for Large Cohorts
11.9 years ago Fong Chun Chan ▴ 320
0
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0
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1.1k
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Comment: C: Extract Exon Features from GenomicFeatures Leads to Inconsistent Pairing of Gene
11.9 years ago Fong Chun Chan ▴ 320
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2
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1.1k
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Extract Exon Features from GenomicFeatures Leads to Inconsistent Pairing of Gene and Exon IDs
GenomicFeatures GenomicFeatures
updated 11.9 years ago by ★ 13k • written 11.9 years ago by ▴ 320
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