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2
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1.3k
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Answer: Answer: Positive and negative value fold value in ATAC seq using DiffBind
19 months ago Rory Stark ★ 5.2k
0
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0
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729
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Answer: Answer: Plotting read densities from DiffBind results
20 months ago Rory Stark ★ 5.2k
0
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1
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951
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Answer: Answer: Question regarding multiple comparisons in DiffBind
20 months ago Rory Stark ★ 5.2k
1
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0
replies
1.1k
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Comment: Comment: How to annotate genes from results of DiffBind
20 months ago Rory Stark ★ 5.2k
1
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1
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4.0k
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Comment: Comment: Help with Error in DiffBind
20 months ago Rory Stark ★ 5.2k
1
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1
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4.0k
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Comment: Comment: Help with Error in DiffBind
20 months ago Rory Stark ★ 5.2k
2
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1
reply
4.0k
views
Answer: Answer: Help with Error in DiffBind
20 months ago Rory Stark ★ 5.2k
1
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0
replies
4.0k
views
Comment: Comment: Help with Error in DiffBind
20 months ago Rory Stark ★ 5.2k
1
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1
reply
4.0k
views
Comment: Comment: Help with Error in DiffBind
20 months ago Rory Stark ★ 5.2k
0
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0
replies
1.2k
views
Answer: Answer: Multiple issues reading in peak sets with Diffbind
20 months ago Rory Stark ★ 5.2k
1
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1
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4.0k
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Comment: Comment: Help with Error in DiffBind
20 months ago Rory Stark ★ 5.2k
0
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1
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1.6k
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Answer: Answer: DiffBind with ChIPseq from histone analysis: EdgeR or Deseq2?
20 months ago Rory Stark ★ 5.2k
0
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1
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2.1k
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Comment: Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g.
20 months ago Rory Stark ★ 5.2k
2
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0
replies
2.8k
views
Answer: Answer: DiffBind on ATAC seq data
20 months ago Rory Stark ★ 5.2k
1
vote
1
reply
4.0k
views
Answer: Answer: Help with Error in DiffBind
20 months ago Rory Stark ★ 5.2k
0
votes
2
replies
2.1k
views
Comment: Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g.
20 months ago Rory Stark ★ 5.2k
0
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0
replies
810
views
Comment: Comment: Using DiffBind Normalization and Contrasting on Fold Change Values
20 months ago Rory Stark ★ 5.2k
0
votes
2
replies
2.1k
views
Comment: Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g.
20 months ago Rory Stark ★ 5.2k
1
vote
1
reply
810
views
Answer: Answer: Using DiffBind Normalization and Contrasting on Fold Change Values
20 months ago Rory Stark ★ 5.2k
0
votes
2
replies
2.1k
views
Comment: Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g.
20 months ago Rory Stark ★ 5.2k
1
vote
1
reply
765
views
Answer: Answer: DiffBind spike-in lib.sizes confusion
20 months ago Rory Stark ★ 5.2k
0
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1
reply
2.1k
views
Answer: Answer: Does DiffBind make consensus peaks sets for samples from a given condition (e.g.
20 months ago Rory Stark ★ 5.2k
0
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0
replies
571
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Answer: Answer: DiffBind---peak region reads or all reads？
20 months ago Rory Stark ★ 5.2k
0
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0
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1.2k
views
Comment: Comment: DiffBind---Normalization problem-spike in or no spike in beforehand?
21 months ago Rory Stark ★ 5.2k
0
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1
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2.8k
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Comment: Comment: Diffbind dba.analyze Error in d$span : $ operator is invalid for atomic vectors
21 months ago Rory Stark ★ 5.2k
0
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0
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1.3k
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Answer: Answer: DiffBind differential analysis
21 months ago Rory Stark ★ 5.2k
1
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1
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1.2k
views
Answer: Answer: DiffBind---Normalization problem-spike in or no spike in beforehand?
21 months ago Rory Stark ★ 5.2k
0
votes
0
replies
840
views
Answer: Answer: DiffBind- differentiate between new peaks and gain peaks
21 months ago Rory Stark ★ 5.2k
0
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0
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797
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Answer: Answer: Setting DBA$config$mergeOverlap for Diffbind
21 months ago Rory Stark ★ 5.2k
0
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1
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1.7k
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Comment: Comment: DiffBind:all samples have 0 counts for all genes.
21 months ago Rory Stark ★ 5.2k
0
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0
replies
716
views
Answer: Answer: Diffbind (or maybe DESeq2) Fold clarification
22 months ago Rory Stark ★ 5.2k
0
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1
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1.4k
views
Comment: Comment: Issue in generating a new DBA object with custom counts
22 months ago Rory Stark ★ 5.2k
0
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1
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1.5k
views
Comment: Comment: Question about Diffbind counts
22 months ago Rory Stark ★ 5.2k
0
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0
replies
1.5k
views
Comment: Comment: Question about Diffbind counts
22 months ago Rory Stark ★ 5.2k
0
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0
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1.5k
views
Comment: Comment: Question about Diffbind counts
22 months ago Rory Stark ★ 5.2k
0
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1
reply
1.5k
views
Comment: Comment: Question about Diffbind counts
22 months ago Rory Stark ★ 5.2k
0
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1
reply
1.4k
views
Comment: Comment: Issue in generating a new DBA object with custom counts
22 months ago Rory Stark ★ 5.2k
0
votes
0
replies
975
views
Answer: Answer: Diffbind matrix/batch effect/normalization
23 months ago Rory Stark ★ 5.2k
0
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1
reply
1.5k
views
Comment: Comment: Question about Diffbind counts
23 months ago Rory Stark ★ 5.2k
1
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0
replies
4.5k
views
Comment: Comment: BiocParallel error with ChIPQC
23 months ago Rory Stark ★ 5.2k
0
votes
0
replies
1.1k
views
Answer: Answer: Minor issue regarding customization of text size in Volcano and Heatmap Plots
23 months ago Rory Stark ★ 5.2k
0
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1
reply
4.5k
views
Comment: Comment: BiocParallel error with ChIPQC
23 months ago Rory Stark ★ 5.2k
0
votes
0
replies
1.4k
views
Answer: Answer: Issue in generating a new DBA object with custom counts
23 months ago Rory Stark ★ 5.2k
1
vote
1
reply
2.2k
views
Comment: Comment: RiP RLE normalisation using spike-in peaks in DiffBind for ChIP-seq
23 months ago Rory Stark ★ 5.2k
2
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1
reply
2.2k
views
Answer: Answer: RiP RLE normalisation using spike-in peaks in DiffBind for ChIP-seq
23 months ago Rory Stark ★ 5.2k
0
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0
replies
1.1k
views
Answer: Answer: DiffBind: Error in pv$called[, mask] : subscript out of bounds
23 months ago Rory Stark ★ 5.2k
0
votes
0
replies
7.3k
views
Comment: Comment: DiffBind GreyListChIP error: Error: BiocParallel errors
23 months ago Rory Stark ★ 5.2k
1
vote
1
reply
872
views
Answer: Answer: DiffBind Loss and Gain location
23 months ago Rory Stark ★ 5.2k
0
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1
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4.4k
views
Comment: Comment: New in DiffBind 3.2: dba.plotProfile() - Peak profiles and profile heatmaps
24 months ago Rory Stark ★ 5.2k
0
votes
1
reply
7.3k
views
Comment: Comment: DiffBind GreyListChIP error: Error: BiocParallel errors
24 months ago Rory Stark ★ 5.2k
931 results • Page 2 of 19
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