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Comment: Comment: DESeq2 with high range of within-group variability
14 hours ago Michael Love 32k
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1.3k
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Comment: Comment: Can NanoString data be analyzed using DESeq2?
1 day ago Michael Love 32k
0
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1
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96
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Answer: Answer: DESeq2 with high range of within-group variability
1 day ago Michael Love 32k
0
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1
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1.3k
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Comment: Comment: Can NanoString data be analyzed using DESeq2?
2 days ago Michael Love 32k
0
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0
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91
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Answer: Answer: DESeq2 multiple conditions, time points and sample types
2 days ago Michael Love 32k
0
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1
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96
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Comment: Comment: DESeq2 with high range of within-group variability
2 days ago Michael Love 32k
1
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0
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54
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Answer: Answer: DESeq2 desing formula for cell fraction and siRNA scramble
2 days ago Michael Love 32k
2
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1
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57
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Answer: Answer: How to retain metadata after running RemoveBatchEffect() after RUVSeq to format
3 days ago Michael Love 32k
0
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1
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53
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Answer: Answer: extracting within time-point differences from time-series model
3 days ago Michael Love 32k
1
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1
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65
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Answer: Answer: How to average DESeq2’s median of ratios from replications
4 days ago Michael Love 32k
0
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0
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66
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Answer: Answer: Time series analysis - DESeq2
4 days ago Michael Love 32k
0
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1
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120
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Comment: Comment: Problem with Tximport to DESeq2
6 days ago Michael Love 32k
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1
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120
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Comment: Comment: Problem with Tximport to DESeq2
6 days ago Michael Love 32k
0
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0
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138
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Comment: Comment: Running swish on a non-reference transcript assembly / tximeta import issue
6 days ago Michael Love 32k
1
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181
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Comment: Comment: DESeq2 comparison two cell types and two genotypes
7 days ago Michael Love 32k
0
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1
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98
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Comment: Comment: subtracting or normalizing RNAseq reads when samples have contaminating reads
7 days ago Michael Love 32k
1
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2
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181
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Comment: Comment: DESeq2 comparison two cell types and two genotypes
7 days ago Michael Love 32k
0
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1
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181
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Comment: Comment: DESeq2 comparison two cell types and two genotypes
7 days ago Michael Love 32k
0
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1
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120
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Answer: Answer: Problem with Tximport to DESeq2
7 days ago Michael Love 32k
0
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1
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643
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Comment: Comment: alpha in lfcshrink?
7 days ago Michael Love 32k
0
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1
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643
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Comment: Comment: alpha in lfcshrink?
7 days ago Michael Love 32k
0
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1
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98
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Answer: Answer: subtracting or normalizing RNAseq reads when samples have contaminating reads
7 days ago Michael Love 32k
1
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0
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90
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Answer: Answer: How to understand the P-value generated by DEseq2
7 days ago Michael Love 32k
2
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1
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181
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Answer: Answer: DESeq2 comparison two cell types and two genotypes
7 days ago Michael Love 32k
0
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1
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138
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Comment: Comment: Running swish on a non-reference transcript assembly / tximeta import issue
8 days ago Michael Love 32k
2
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1
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81
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Answer: Answer: handling outliers with DESeq2
8 days ago Michael Love 32k
0
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1
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138
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Comment: Comment: Running swish on a non-reference transcript assembly / tximeta import issue
8 days ago Michael Love 32k
0
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1
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138
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Answer: Answer: Running swish on a non-reference transcript assembly / tximeta import issue
9 days ago Michael Love 32k
0
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0
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1.4k
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Comment: Comment: Deseq2 Multiple condition issue
9 days ago Michael Love 32k
0
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1
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1.4k
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Comment: Comment: Deseq2 Multiple condition issue
9 days ago Michael Love 32k
0
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1
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151
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Comment: Comment: DESeq2 coefficient names
14 days ago Michael Love 32k
0
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1
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151
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Comment: Comment: DESeq2 coefficient names
14 days ago Michael Love 32k
0
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1
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151
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Comment: Comment: DESeq2 coefficient names
14 days ago Michael Love 32k
0
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1
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153
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Answer: Answer: The correlation between normalized counts and TPM based on 2-factor analysis by
14 days ago Michael Love 32k
0
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1
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153
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Comment: Comment: The correlation between normalized counts and TPM based on 2-factor analysis by
14 days ago Michael Love 32k
0
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1
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151
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Answer: Answer: DESeq2 coefficient names
14 days ago Michael Love 32k
1
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0
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157
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Comment: Comment: DESeq2 unmix function
14 days ago Michael Love 32k
1
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1
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90
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Answer: Answer: DESeq2 for TRAP-seq methods
16 days ago Michael Love 32k
2
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1
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157
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Answer: Answer: DESeq2 unmix function
16 days ago Michael Love 32k
1
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0
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111
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Comment: Comment: Which DESeq normalization method?
17 days ago Michael Love 32k
1
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1
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111
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Answer: Answer: Which DESeq normalization method?
17 days ago Michael Love 32k
0
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0
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87
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Answer: Answer: Correcting partially penetrant batch effect
18 days ago Michael Love 32k
1
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0
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93
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Answer: Answer: tximeta Error in UseMethod("filter_")
18 days ago Michael Love 32k
0
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0
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217
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Comment: Comment: Problem with estimateSizeFactors due to avgTxLength
19 days ago Michael Love 32k
0
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1
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269
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Comment: Comment: between and within subjects design with batch correction
20 days ago Michael Love 32k
0
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1
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269
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Comment: Comment: between and within subjects design with batch correction
20 days ago Michael Love 32k
0
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1
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269
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Comment: Comment: between and within subjects design with batch correction
20 days ago Michael Love 32k
1
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0
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68
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Answer: Answer: plotMA difference using or not a sub matrix
20 days ago Michael Love 32k
0
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0
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881
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Comment: Comment: DESeq2: Multivariate Models and Model Statistic
20 days ago Michael Love 32k
1
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1
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269
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Comment: Comment: between and within subjects design with batch correction
20 days ago Michael Love 32k
6,479 results • Page 1 of 130
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