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1
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462
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Answer:
Answer: RNASeq Time Course Question
3 months ago
Michael Love
43k
0
votes
0
replies
802
views
Comment:
Comment: Highly DE genes but small count difference within conditions
3 months ago
Michael Love
43k
0
votes
1
reply
872
views
Answer:
Answer: [DESeq2] Introduce a bias in DESeq2
3 months ago
Michael Love
43k
0
votes
1
reply
1.2k
views
Comment:
Comment: DEseq2 time-series design
3 months ago
Michael Love
43k
0
votes
1
reply
802
views
Comment:
Comment: Highly DE genes but small count difference within conditions
3 months ago
Michael Love
43k
0
votes
1
reply
802
views
Comment:
Comment: Highly DE genes but small count difference within conditions
3 months ago
Michael Love
43k
0
votes
1
reply
802
views
Comment:
Comment: Highly DE genes but small count difference within conditions
3 months ago
Michael Love
43k
1
vote
1
reply
802
views
Answer:
Answer: Highly DE genes but small count difference within conditions
3 months ago
Michael Love
43k
0
votes
1
reply
333
views
Answer:
Answer: RNA-Seq p value range variation
3 months ago
Michael Love
43k
0
votes
0
replies
406
views
Comment:
Comment: How can I obtain DEGs that are resulted from using salmon in alignment-based mod
3 months ago
Michael Love
43k
0
votes
0
replies
502
views
Answer:
Answer: Poor dispersion fit in DESeq2
3 months ago
Michael Love
43k
0
votes
0
replies
742
views
Answer:
Answer: DESeq2 analysis on 2 plant lines infected with virus, with 2 time points (days p
3 months ago
Michael Love
43k
0
votes
0
replies
567
views
Answer:
Answer: DESeq2 design and contrasts with 2 drug-treated and one control group
3 months ago
Michael Love
43k
0
votes
0
replies
6.5k
views
Comment:
Comment: DESeq2 with proteomics data
3 months ago
Michael Love
43k
0
votes
0
replies
325
views
Answer:
Answer: Many DEGs (Is a high percentage of DEGs acceptable in DESeq2)?
3 months ago
Michael Love
43k
0
votes
0
replies
319
views
Answer:
Answer: Dealing with 0 miRNA counts in DESeq2 analysis and influence in adjusted p-value
4 months ago
Michael Love
43k
1
vote
0
replies
15k
views
Comment:
Comment: [DESeq2] time series strain-specific differences over time
4 months ago
Michael Love
43k
1
vote
1
reply
15k
views
Comment:
Comment: [DESeq2] time series strain-specific differences over time
4 months ago
Michael Love
43k
1
vote
1
reply
15k
views
Comment:
Comment: [DESeq2] time series strain-specific differences over time
4 months ago
Michael Love
43k
0
votes
0
replies
1.5k
views
Comment:
Comment: [DESeq2] Normalization of External Test Dataset for Machine Learning (ML) Applic
4 months ago
Michael Love
43k
2
votes
1
reply
1.5k
views
Answer:
Answer: [DESeq2] Normalization of External Test Dataset for Machine Learning (ML) Applic
4 months ago
Michael Love
43k
0
votes
0
replies
1.5k
views
Comment:
Comment: [DESeq2] Normalization of External Test Dataset for Machine Learning (ML) Applic
4 months ago
Michael Love
43k
0
votes
0
replies
438
views
Answer:
Answer: tximport data import
4 months ago
Michael Love
43k
1
vote
1
reply
860
views
Comment:
Comment: Size factor normalized counts for between sample comparisons - correct?
4 months ago
Michael Love
43k
0
votes
1
reply
919
views
Comment:
Comment: Recommendations for DESeq2 Independent Filtering with Pseudobulk Data
4 months ago
Michael Love
43k
0
votes
1
reply
860
views
Comment:
Comment: Size factor normalized counts for between sample comparisons - correct?
4 months ago
Michael Love
43k
1
vote
1
reply
860
views
Answer:
Answer: Size factor normalized counts for between sample comparisons - correct?
4 months ago
Michael Love
43k
0
votes
1
reply
681
views
Comment:
Comment: DESeq design with and without intercept is giving different results
4 months ago
Michael Love
43k
1
vote
0
replies
1.5k
views
Comment:
Comment: stat value is throwed out after lfcShrink in DESeq2
4 months ago
Michael Love
43k
0
votes
1
reply
681
views
Comment:
Comment: DESeq design with and without intercept is giving different results
4 months ago
Michael Love
43k
0
votes
1
reply
456
views
Answer:
Answer: Inquiry on Using DESeq2 for Analyzing Differential Translation Efficiency
4 months ago
Michael Love
43k
0
votes
1
reply
681
views
Answer:
Answer: DESeq design with and without intercept is giving different results
4 months ago
Michael Love
43k
0
votes
0
replies
858
views
Comment:
Comment: RNASeq normlization for samples with global shift in gene expression
4 months ago
Michael Love
43k
0
votes
1
reply
858
views
Answer:
Answer: RNASeq normlization for samples with global shift in gene expression
4 months ago
Michael Love
43k
0
votes
0
replies
378
views
Answer:
Answer: Analysis of transcription inhibition with DESeq2
4 months ago
Michael Love
43k
0
votes
0
replies
6.7k
views
Comment:
Comment: Understanding interaction term in DESeq2
5 months ago
Michael Love
43k
0
votes
0
replies
4.2k
views
Comment:
Comment: DESeq2: handling NA values in colData
5 months ago
Michael Love
43k
1
vote
1
reply
919
views
Answer:
Answer: Recommendations for DESeq2 Independent Filtering with Pseudobulk Data
5 months ago
Michael Love
43k
0
votes
0
replies
350
views
Answer:
Answer: Using DESeq2 for Analyzing AMR Gene Variations in Water Samples Post-Treatment
5 months ago
Michael Love
43k
1
vote
1
reply
595
views
Answer:
Answer: Combining DESeq2 and Within-Group Variability to Identify Stochastic Genes
5 months ago
Michael Love
43k
1
vote
1
reply
820
views
Answer:
Answer: How to use specific size factors and average transcript lengths from tximport i
5 months ago
Michael Love
43k
1
vote
0
replies
1.3k
views
Answer:
Answer: What does evidence of batch effect in bulk rnaseq look like?
5 months ago
Michael Love
43k
0
votes
0
replies
569
views
Answer:
Answer: DESeq2 - Outliers influencing sig DEGs, filter counts per group samples, not by
5 months ago
Michael Love
43k
0
votes
0
replies
658
views
Answer:
Answer: DESeq2 Likelihood ratio test + contrast option + Volcano plot
5 months ago
Michael Love
43k
0
votes
1
reply
1.1k
views
Comment:
Comment: Error running tximeta
5 months ago
Michael Love
43k
0
votes
0
replies
1.1k
views
Comment:
Comment: DGE with a Continuous Variable
5 months ago
Michael Love
43k
0
votes
1
reply
1.1k
views
Comment:
Comment: Error running tximeta
5 months ago
Michael Love
43k
1
vote
0
replies
1.1k
views
Comment:
Comment: DGE with a Continuous Variable
5 months ago
Michael Love
43k
0
votes
1
reply
1.1k
views
Comment:
Comment: DGE with a Continuous Variable
5 months ago
Michael Love
43k
1
vote
2
replies
855
views
Comment:
Comment: A question occur when using DESeq2 on a complex design
5 months ago
Michael Love
43k
8,092 results • Page
2 of 162
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