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Answer:
Answer: Merging of Human and Mouse SingleCellExperiment Objects Error
10 weeks ago
Aaron Lun
★ 28k
0
votes
0
replies
335
views
Answer:
Answer: scran package: quickCluster and calculateSumFactors parallelization
10 weeks ago
Aaron Lun
★ 28k
0
votes
2
replies
593
views
Answer:
Answer: Cannot use findOverlaps with 2 GInteractions objects with different ranges.
10 weeks ago
Aaron Lun
★ 28k
0
votes
1
reply
947
views
Answer:
Answer: Support of parquet files for on-disk Bioconductor objects
6 months ago
Aaron Lun
★ 28k
0
votes
0
replies
947
views
Comment:
Comment: Support of parquet files for on-disk Bioconductor objects
6 months ago
Aaron Lun
★ 28k
0
votes
2
replies
947
views
Comment:
Comment: Support of parquet files for on-disk Bioconductor objects
6 months ago
Aaron Lun
★ 28k
0
votes
0
replies
1.1k
views
Answer:
Answer: SingleR and gcc-8.3.0
12 months ago
Aaron Lun
★ 28k
2
votes
2
replies
1.5k
views
Answer:
Answer: Efficiently working with HDF5-backed SingleCellExperiments
18 months ago
Aaron Lun
★ 28k
1
vote
1
reply
737
views
Answer:
Answer: How to detect LacZ tagged cells from single cell
18 months ago
Aaron Lun
★ 28k
1
vote
1
reply
864
views
Comment:
Comment: Summary of library size factor is all equal to one
18 months ago
Aaron Lun
★ 28k
0
votes
1
reply
886
views
Answer:
Answer: how to plot a fitting line on the testPseudotime
18 months ago
Aaron Lun
★ 28k
1
vote
1
reply
2.2k
views
Answer:
Answer: `emptyDrops()` calling 'too many' non-empty droplets
19 months ago
Aaron Lun
★ 28k
4
votes
1
reply
1.0k
views
Answer:
Answer: how to do downstram analysis to cells which are subsetted after MNN batch-correc
19 months ago
Aaron Lun
★ 28k
0
votes
0
replies
1.9k
views
Answer:
Answer: how to make the "reconstructed" value in intergated scRNA-seq UMAP plot more rea
19 months ago
Aaron Lun
★ 28k
1
vote
1
reply
1.4k
views
Comment:
Comment: batchelor correctExperiments() returns Error in eval(subscript, envir = eframe,
21 months ago
Aaron Lun
★ 28k
1
vote
1
reply
1.4k
views
Answer:
Answer: batchelor correctExperiments() returns Error in eval(subscript, envir = eframe,
21 months ago
Aaron Lun
★ 28k
0
votes
0
replies
870
views
Comment:
Comment: celldex error when downloading reference datasets
2.1 years ago
Aaron Lun
★ 28k
1
vote
0
replies
627
views
Answer:
Answer: Input format for `combinations` in `hashedDrops`
2.2 years ago
Aaron Lun
★ 28k
0
votes
0
replies
824
views
Answer:
Answer: Using controlAmbience with multiple samples and conditions
2.2 years ago
Aaron Lun
★ 28k
2
votes
1
reply
962
views
Answer:
Answer: Block weights in scran::pairwiseTTests
2.4 years ago
Aaron Lun
★ 28k
1
vote
0
replies
1.0k
views
Answer:
Answer: scran computeSumFactors showing error
2.4 years ago
Aaron Lun
★ 28k
0
votes
0
replies
2.5k
views
Comment:
Comment: How to run runNMF in parallel?
2.4 years ago
Aaron Lun
★ 28k
0
votes
0
replies
636
views
Answer:
Answer: CSAW Users Guide Ch 4-6 are not accessible/readable
2.4 years ago
Aaron Lun
★ 28k
1
vote
1
reply
2.9k
views
Comment:
Comment: celldex ensembl gene annotation issue
2.4 years ago
Aaron Lun
★ 28k
1
vote
1
reply
2.9k
views
Answer:
Answer: celldex ensembl gene annotation issue
2.4 years ago
Aaron Lun
★ 28k
1
vote
1
reply
2.9k
views
Comment:
Comment: celldex ensembl gene annotation issue
2.4 years ago
Aaron Lun
★ 28k
1
vote
1
reply
1.6k
views
Answer:
Answer: Ensuring reproducibility in BiocParallel SingleCellExperiment workflows
2.4 years ago
Aaron Lun
★ 28k
0
votes
1
reply
2.5k
views
Comment:
Comment: How to run runNMF in parallel?
2.5 years ago
Aaron Lun
★ 28k
2
votes
1
reply
921
views
Answer:
Answer: Does MNN removes same average batch vector from all cells or each cell has it's
2.5 years ago
Aaron Lun
★ 28k
0
votes
0
replies
1.0k
views
Answer:
Answer: Identify a scRNASeq cell-population using a bulk RNA Seq dataset of that populat
2.6 years ago
Aaron Lun
★ 28k
0
votes
1
reply
954
views
Answer:
Answer: Converting a GInteractions object to a dataframe
2.7 years ago
Aaron Lun
★ 28k
2
votes
1
reply
813
views
Answer:
Answer: diffHic's totalCounts fails with multiple files, but rest of test code works
2.7 years ago
Aaron Lun
★ 28k
0
votes
1
reply
765
views
Answer:
Answer: Can't normalize samples in diffHic
2.7 years ago
Aaron Lun
★ 28k
2
votes
1
reply
1.3k
views
Answer:
Answer: scater::calculatePCA error when using BPPARAM = MulticoreParam
2.8 years ago
Aaron Lun
★ 28k
1
vote
1
reply
1.2k
views
Comment:
Comment: could not duplicate the fragment length in "Reads to Regions" csaw tutorial
2.8 years ago
Aaron Lun
★ 28k
1
vote
1
reply
1.3k
views
Comment:
Comment: DropletUtils::swappedDrops segfault memory not mapped
2.9 years ago
Aaron Lun
★ 28k
0
votes
1
reply
1.3k
views
Answer:
Answer: DropletUtils::swappedDrops segfault memory not mapped
2.9 years ago
Aaron Lun
★ 28k
2
votes
0
replies
967
views
Answer:
Answer: barcodeRanks unusual warning "In smooth.spline(x[new.keep], y[new.keep], df = df
2.9 years ago
Aaron Lun
★ 28k
1
vote
1
reply
1.2k
views
Answer:
Answer: could not duplicate the fragment length in "Reads to Regions" csaw tutorial
2.9 years ago
Aaron Lun
★ 28k
3
votes
0
replies
1.3k
views
Answer:
Answer: Effect of feature number on adjusted p-values
2.9 years ago
Aaron Lun
★ 28k
1
vote
0
replies
2.4k
views
Answer:
Answer: After having the output from SingleR for cell type annotation, what's the next s
2.9 years ago
Aaron Lun
★ 28k
4
votes
0
replies
1.5k
views
Answer:
Answer: how can I annotate my scRNAseq clusters from a Rat experiment?
2.9 years ago
Aaron Lun
★ 28k
3
votes
1
reply
926
views
Answer:
Answer: Should we apply DropletUtils on control case separately or on a common sce objec
2.9 years ago
Aaron Lun
★ 28k
0
votes
1
reply
2.8k
views
Comment:
Comment: EdgeR glmLRT vs glmQLFTest
2.9 years ago
Aaron Lun
★ 28k
3
votes
1
reply
1.9k
views
Answer:
Answer: How to apply limma-trend or voom to batch corrected single cell data? (non-integ
2.9 years ago
Aaron Lun
★ 28k
1
vote
0
replies
1.8k
views
Answer:
Answer: install celldex in r4. 04
3.0 years ago
Aaron Lun
★ 28k
2
votes
1
reply
1.6k
views
Answer:
Answer: Is it possible to create `HDF5Array` Delayed Arrays from HDF5 files hosted on S3
3.1 years ago
Aaron Lun
★ 28k
1
vote
0
replies
1.1k
views
Comment:
Comment: Does hashedDrops support 'imbalanced' combinations of HTOs?
3.1 years ago
Aaron Lun
★ 28k
0
votes
1
reply
1.1k
views
Comment:
Comment: Does hashedDrops support 'imbalanced' combinations of HTOs?
3.1 years ago
Aaron Lun
★ 28k
1
vote
1
reply
1.1k
views
Answer:
Answer: Does hashedDrops support 'imbalanced' combinations of HTOs?
3.1 years ago
Aaron Lun
★ 28k
2,862 results • Page
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