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Comment: C: edgeR: multi-subject time series analysis
8.0 years ago Aaron Lun ★ 29k
1
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2.9k
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Answer: A: limma voom's (and edger's) use of scaling factors
8.0 years ago Aaron Lun ★ 29k
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2.4k
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Comment: C: limma- time course multiple treatments
8.0 years ago Aaron Lun ★ 29k
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1
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2.4k
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Comment: C: limma- time course multiple treatments
8.0 years ago Aaron Lun ★ 29k
0
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2.3k
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Answer: A: edgeR: multi-subject time series analysis
8.0 years ago Aaron Lun ★ 29k
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2.3k
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Comment: C: edgeR: multi-subject time series analysis
8.0 years ago Aaron Lun ★ 29k
0
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1.9k
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Answer: A: How to save different coefficients as different outputs using topTable in limma
8.0 years ago Aaron Lun ★ 29k
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1
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2.3k
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Comment: C: edgeR: multi-subject time series analysis
8.0 years ago Aaron Lun ★ 29k
0
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2
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2.4k
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Answer: A: limma- time course multiple treatments
8.0 years ago Aaron Lun ★ 29k
0
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1
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2.3k
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Comment: C: edgeR: multi-subject time series analysis
8.0 years ago Aaron Lun ★ 29k
1
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1.1k
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Answer: A: ERROR: dependencies RWeka, rmcfs are not available for package BASiNET
8.0 years ago Aaron Lun ★ 29k
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6.2k
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Comment: C: Camera and ROAST
8.0 years ago Aaron Lun ★ 29k
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6.2k
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Answer: A: Camera and ROAST
8.0 years ago Aaron Lun ★ 29k
2
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3.2k
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Answer: A: limma - contrast.fit returns coefficients without names
8.0 years ago Aaron Lun ★ 29k
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1.3k
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Comment: C: should subgroups of comparisons be analyzed separately in Limma
8.0 years ago Aaron Lun ★ 29k
0
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2.0k
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Comment: C: Boxplot and Identification of DEG
8.0 years ago Aaron Lun ★ 29k
1
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1
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3.9k
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Comment: C: edgeR: Should there be a normalization step for CRISPR screens? How to deal with
8.0 years ago Aaron Lun ★ 29k
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3.6k
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Comment: C: Found more than one class
8.0 years ago Aaron Lun ★ 29k
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1
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3.9k
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Comment: C: edgeR: Should there be a normalization step for CRISPR screens? How to deal with
8.0 years ago Aaron Lun ★ 29k
4
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3.9k
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Answer: A: edgeR: Should there be a normalization step for CRISPR screens? How to deal with
8.0 years ago Aaron Lun ★ 29k
1
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1
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2.0k
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Answer: A: Boxplot and Identification of DEG
8.0 years ago Aaron Lun ★ 29k
1
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1
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1.3k
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Answer: A: Time-course group difference analysis with repeated individuals using limma-voom
8.0 years ago Aaron Lun ★ 29k
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1.4k
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Comment: C: Design matrix for longitudinal discordant twin analysis with limma
8.0 years ago Aaron Lun ★ 29k
0
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1
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3.9k
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Comment: C: edgeR: Should there be a normalization step for CRISPR screens? How to deal with
8.0 years ago Aaron Lun ★ 29k
0
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0
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2.9k
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Comment: C: Adaptation of DESeq/edgeR model for CRISPR drop-out screen
8.0 years ago Aaron Lun ★ 29k
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5.1k
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Comment: C: Error while processing BAM file with Picard FixMateInformation
8.0 years ago Aaron Lun ★ 29k
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1
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1.4k
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Answer: A: Design matrix for longitudinal discordant twin analysis with limma
8.0 years ago Aaron Lun ★ 29k
0
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1.8k
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Comment: C: limma. After running a differential expression analysis... Can you get the indiv
8.0 years ago Aaron Lun ★ 29k
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4.2k
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Comment: C: Two-way anova 2x2 design with limma
8.0 years ago Aaron Lun ★ 29k
0
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1
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4.2k
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Comment: C: Two-way anova 2x2 design with limma
8.0 years ago Aaron Lun ★ 29k
3
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2
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2.2k
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Answer: A: How to use limma to do regularization for Ballgown
8.0 years ago Aaron Lun ★ 29k
2
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7.5k
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Answer: A: Raw count data for SC3 and SingleCellExperiment set problem
8.0 years ago Aaron Lun ★ 29k
0
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2.4k
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Comment: C: Interpretation of the log fold change for a time course/factorial design analysi
8.0 years ago Aaron Lun ★ 29k
0
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1
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2.4k
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Answer: A: Interpretation of the log fold change for a time course/factorial design analysi
8.0 years ago Aaron Lun ★ 29k
1
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0
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4.2k
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Answer: A: Two-way anova 2x2 design with limma
8.0 years ago Aaron Lun ★ 29k
1
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0
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2.0k
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Answer: A: Strange distribution of logFC
8.0 years ago Aaron Lun ★ 29k
2
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1.6k
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Answer: A: RNASeq interaction between factors with edgeR when cpms tend to zero
8.0 years ago Aaron Lun ★ 29k
0
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1
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2.0k
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Comment: C: Strange distribution of logFC
8.0 years ago Aaron Lun ★ 29k
0
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1
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2.0k
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Comment: C: Strange distribution of logFC
8.0 years ago Aaron Lun ★ 29k
1
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1
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2.2k
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Answer: A: DGE analysis with TMM and gene length normalized data.
8.0 years ago Aaron Lun ★ 29k
0
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1
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2.0k
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Comment: C: Strange distribution of logFC
8.0 years ago Aaron Lun ★ 29k
0
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1
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3.7k
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Comment: C: Remove batch effect using individuals as random in the model in Limma
8.0 years ago Aaron Lun ★ 29k
1
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1
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3.7k
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Answer: A: Remove batch effect using individuals as random in the model in Limma
8.0 years ago Aaron Lun ★ 29k
1
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1
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2.4k
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Comment: C: Is there are better way to improve the design via blocking or contrasts while us
8.0 years ago Aaron Lun ★ 29k
5
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2
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2.4k
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Answer: A: Is there are better way to improve the design via blocking or contrasts while us
8.1 years ago • updated 8.0 years ago Aaron Lun ★ 29k
0
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1
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2.9k
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Answer: A: Adaptation of DESeq/edgeR model for CRISPR drop-out screen
8.0 years ago Aaron Lun ★ 29k
0
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1
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3.8k
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Answer: A: Design of 'group' object in DGElist function
8.0 years ago Aaron Lun ★ 29k
0
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1
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2.0k
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Comment: C: DEG with Limma without replicates and best plots to represent results
8.0 years ago Aaron Lun ★ 29k
2
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1
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2.0k
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Answer: A: DEG with Limma without replicates and best plots to represent results
8.0 years ago Aaron Lun ★ 29k
1
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2
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2.7k
views
Answer: A: Venndigram of LIMMA decideTests() function for more than 5 sets
8.1 years ago Aaron Lun ★ 29k
2,880 results • Page 21 of 58
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