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Answer: A: computeSumFactors: warning about cluster size
8.3 years ago Aaron Lun ★ 29k
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3.5k
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Comment: C: Zero inflation in RUV normalization and DE for single cell data
8.3 years ago Aaron Lun ★ 29k
2
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3.9k
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Answer: A: Estimating cell size factors for single cell RNA-seq data
8.3 years ago Aaron Lun ★ 29k
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3.5k
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Answer: A: Zero inflation in RUV normalization and DE for single cell data
8.3 years ago Aaron Lun ★ 29k
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5.6k
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Comment: C: Dealing with (blood) contamination in RNA-seq data
8.3 years ago Aaron Lun ★ 29k
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5.6k
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Comment: C: Dealing with (blood) contamination in RNA-seq data
8.3 years ago Aaron Lun ★ 29k
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5.6k
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Comment: C: Dealing with (blood) contamination in RNA-seq data
8.3 years ago Aaron Lun ★ 29k
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2.4k
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Comment: C: edgeR in a situation with unbalanced design: to include only subjects with match
8.3 years ago Aaron Lun ★ 29k
1
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2.3k
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Answer: A: limma: The topTable function implementation when outputin the differential expre
8.3 years ago Aaron Lun ★ 29k
1
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1
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2.4k
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Answer: A: edgeR in a situation with unbalanced design: to include only subjects with match
8.3 years ago Aaron Lun ★ 29k
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1
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9.6k
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Comment: C: Standard error and effect size from Limma
8.3 years ago Aaron Lun ★ 29k
1
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1
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2.9k
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Comment: C: edgeR: How to set model for glmQLFTest in time-course experiment (compared to gl
8.3 years ago Aaron Lun ★ 29k
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1
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3.3k
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Comment: C: How does newSCESet calculate expression matrix
8.3 years ago Aaron Lun ★ 29k
1
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1
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2.9k
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Comment: C: edgeR: How to set model for glmQLFTest in time-course experiment (compared to gl
8.3 years ago Aaron Lun ★ 29k
1
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1
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2.9k
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Comment: C: edgeR: How to set model for glmQLFTest in time-course experiment (compared to gl
8.3 years ago Aaron Lun ★ 29k
1
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0
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48k
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Comment: C: Differential expression analysis starting from TPM data
8.3 years ago Aaron Lun ★ 29k
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48k
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Answer: A: Differential expression analysis starting from TPM data
8.3 years ago Aaron Lun ★ 29k
1
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48k
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Comment: C: Differential expression analysis starting from TPM data
8.3 years ago Aaron Lun ★ 29k
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3.3k
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Comment: C: How does newSCESet calculate expression matrix
8.3 years ago Aaron Lun ★ 29k
2
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1.9k
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Answer: A: Extracting non-interacting hic reads to create a sam/bam file
8.3 years ago Aaron Lun ★ 29k
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1
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3.3k
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Comment: C: How does newSCESet calculate expression matrix
8.3 years ago Aaron Lun ★ 29k
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1
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3.3k
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Comment: C: How does newSCESet calculate expression matrix
8.3 years ago Aaron Lun ★ 29k
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3.3k
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Comment: C: How does newSCESet calculate expression matrix
8.3 years ago Aaron Lun ★ 29k
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3.2k
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Comment: C: Exporting normalized counts over final DB windows from csaw
8.3 years ago Aaron Lun ★ 29k
1
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1.9k
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Answer: A: Scater normalizeExprs() batch effect
8.3 years ago Aaron Lun ★ 29k
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3.2k
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Comment: C: Exporting normalized counts over final DB windows from csaw
8.3 years ago Aaron Lun ★ 29k
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1
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3.2k
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Comment: C: Exporting normalized counts over final DB windows from csaw
8.3 years ago Aaron Lun ★ 29k
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1
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3.2k
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Comment: C: Exporting normalized counts over final DB windows from csaw
8.3 years ago Aaron Lun ★ 29k
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1
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3.2k
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Comment: C: Exporting normalized counts over final DB windows from csaw
8.3 years ago Aaron Lun ★ 29k
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2.5k
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Comment: C: edgeR DE gene calculation problem
8.3 years ago Aaron Lun ★ 29k
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1
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2.5k
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Comment: C: edgeR DE gene calculation problem
8.3 years ago Aaron Lun ★ 29k
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1
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2.4k
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Comment: C: Designing a model matrix and further process?
8.3 years ago Aaron Lun ★ 29k
1
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2.5k
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Comment: C: Identify up and down regulated genes in affymetrix data
8.3 years ago Aaron Lun ★ 29k
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1
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2.5k
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Comment: C: edgeR DE gene calculation problem
8.3 years ago Aaron Lun ★ 29k
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1
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2.5k
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Comment: C: edgeR DE gene calculation problem
8.3 years ago Aaron Lun ★ 29k
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1
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2.5k
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Comment: C: edgeR DE gene calculation problem
8.3 years ago Aaron Lun ★ 29k
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0
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2.5k
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Comment: C: edgeR DE gene calculation problem
8.3 years ago Aaron Lun ★ 29k
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1
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2.5k
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Comment: C: Identify up and down regulated genes in affymetrix data
8.3 years ago Aaron Lun ★ 29k
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1
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2.4k
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Comment: C: Designing a model matrix and further process?
8.3 years ago Aaron Lun ★ 29k
4
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1
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2.4k
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Answer: A: Designing a model matrix and further process?
8.3 years ago Aaron Lun ★ 29k
0
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2.5k
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Comment: C: edgeR DE gene calculation problem
8.3 years ago Aaron Lun ★ 29k
2
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3
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4.5k
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Comment: C: markdown is coming to the support site
8.3 years ago Aaron Lun ★ 29k
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2.8k
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Comment: C: [MnnCorrect] In case of known subpopulations
8.3 years ago Aaron Lun ★ 29k
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53k
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Comment: C: LogFC: how do you determine the cutoff for differentially expressed genes?
8.3 years ago Aaron Lun ★ 29k
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3
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2.5k
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Answer: A: edgeR DE gene calculation problem
8.3 years ago Aaron Lun ★ 29k
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1
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2.8k
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Comment: C: [MnnCorrect] In case of known subpopulations
8.3 years ago Aaron Lun ★ 29k
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2.8k
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Answer: A: [MnnCorrect] In case of known subpopulations
8.3 years ago Aaron Lun ★ 29k
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0
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2.5k
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Answer: A: Observation/case weighting in cluster analysis in R
8.3 years ago Aaron Lun ★ 29k
1
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1
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53k
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Comment: C: LogFC: how do you determine the cutoff for differentially expressed genes?
8.3 years ago Aaron Lun ★ 29k
1
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0
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53k
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Comment: C: LogFC: how do you determine the cutoff for differentially expressed genes?
8.3 years ago Aaron Lun ★ 29k
2,880 results • Page 25 of 58
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