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2
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1
reply
2.1k
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Answer:
A: Why is batch effect correction an option in SCAN.UPC normalization?
5.7 years ago
Stephen Piccolo
▴ 590
0
votes
1
reply
1.9k
views
Answer:
A: Transcript-level SCAN.UPC preprocessing for Affymetrix HTA 2.0 arrays
6.3 years ago
Stephen Piccolo
▴ 590
1
vote
1
reply
1.2k
views
Answer:
A: ParseMetaFromGtfFile() from SCAN.UPC package fails to produce annotation file
6.7 years ago
Stephen Piccolo
▴ 590
1
vote
0
replies
1.1k
views
Answer:
A: UPC transposes output data
7.2 years ago
Stephen Piccolo
▴ 590
0
votes
1
reply
1.4k
views
Answer:
A: UPC correction for GC content?
8.2 years ago
Stephen Piccolo
▴ 590
0
votes
0
replies
1.5k
views
Answer:
A: UPC method giving error for Microarray dataset
8.3 years ago
Stephen Piccolo
▴ 590
0
votes
0
replies
1.2k
views
Answer:
A: UPC RNA-Seq individual samples
8.4 years ago
Stephen Piccolo
▴ 590
0
votes
0
replies
1.2k
views
Answer:
A: RNA-Seq Read Counts for SCAN.UPC
8.4 years ago
Stephen Piccolo
▴ 590
0
votes
0
replies
1.2k
views
Answer:
A: SCAN.UPC eset not providing phenoData
8.7 years ago
Stephen Piccolo
▴ 590
0
votes
1
reply
1.5k
views
Answer:
A: SCAN.UPC giving error for multiple input files
8.7 years ago
Stephen Piccolo
▴ 590
0
votes
1
reply
1.7k
views
Answer:
A: SCAN-normalized values on log2 scale?
8.8 years ago
Stephen Piccolo
▴ 590
0
votes
1
reply
1.8k
views
Answer:
A: Log2FC values very small with SCAN
8.8 years ago
Stephen Piccolo
▴ 590
2
votes
0
replies
4.2k
views
Answer:
A: normalization with mas5
8.8 years ago
Stephen Piccolo
▴ 590
1
vote
1
reply
2.7k
views
Answer:
A: Possible ways of performing non-specific intensity filtering on Perfect-match on
9.0 years ago
Stephen Piccolo
▴ 590
0
votes
1
reply
1.5k
views
Answer:
A: UPC and Sequence file to remove GC bias
9.1 years ago
Stephen Piccolo
▴ 590
1
vote
0
replies
1.6k
views
Answer:
A: SCAN UPC normalisation
9.1 years ago
Stephen Piccolo
▴ 590
4
votes
3
replies
14k
views
Answer:
A: Can I feed TCGA normalized count data to EdgeR for differential gene expression
9.1 years ago
Stephen Piccolo
▴ 590
0
votes
0
replies
1.2k
views
Answer:
A: SCAN.UPC for Agilent single channel and Illumina
9.2 years ago
Stephen Piccolo
▴ 590
0
votes
1
reply
5.2k
views
Answer:
A: How to use brainarray custom cdf with any bioconductor package?
9.4 years ago
Stephen Piccolo
▴ 590
0
votes
0
replies
1.7k
views
Answer:
A: how to normalize mogene 2.1 st array?
9.4 years ago
Stephen Piccolo
▴ 590
0
votes
1
reply
3.3k
views
Answer:
A: Normalizing Expressionset Exprs without Raw CEL files
9.5 years ago
Stephen Piccolo
▴ 590
0
votes
1
reply
1.8k
views
Answer:
A: SCAN.UPC for microarray and RNAseq data
9.9 years ago
Stephen Piccolo
▴ 590
0
votes
0
replies
1.3k
views
Answer:
A: Normalising both Affy mogene 1.0 and 1.1 together
10.0 years ago
Stephen Piccolo
▴ 590
0
votes
0
replies
1.4k
views
Answer:
A: Comparison of murine and human microarray data
10.0 years ago
Stephen Piccolo
▴ 590
0
votes
0
replies
1.3k
views
Answer:
A: Memory problem with rma()
10.2 years ago
Stephen Piccolo
▴ 590
0
votes
1
reply
2.4k
views
Answer:
A: using frma and brainarray cdf on exon arrays
10.3 years ago
Stephen Piccolo
▴ 590
0
votes
2
replies
1.7k
views
Answer:
A: SCAN.UPC for Illumina arrays?
10.5 years ago
Stephen Piccolo
▴ 590
0
votes
1
reply
1.8k
views
Answer:
A: help with SCAN.UPC and u133aaofav2
10.5 years ago
Stephen Piccolo
▴ 590
0
votes
1
reply
1.5k
views
Answer:
A: SCAN.UPC vs NUSE
10.6 years ago
Stephen Piccolo
▴ 590
0
votes
0
replies
1.6k
views
Answer:
A: barcode with custom CDF
11.1 years ago
Stephen Piccolo
▴ 590
0
votes
0
replies
1.3k
views
Answer:
A: bout big data set for Affy R packge
11.4 years ago
Stephen Piccolo
▴ 590
0
votes
0
replies
1.4k
views
Answer:
A: SCAN UPC probability - validation of gene expression results using UPC
11.5 years ago
Stephen Piccolo
▴ 590
0
votes
0
replies
1.2k
views
Answer:
A: [combat] UPC availablility
11.5 years ago
Stephen Piccolo
▴ 590
0
votes
1
reply
1.2k
views
Answer:
A: New Bioconductor Package: SCAN.UPC
11.5 years ago
Stephen Piccolo
▴ 590
0
votes
0
replies
1.2k
views
Answer:
A: Read big file!
14.7 years ago
Stephen Piccolo
▴ 590
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