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Answer: Answer: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param
12 days ago Tim Peters ▴ 180
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334
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Comment: Comment: unable to access Annotationhub latest record
24 days ago Tim Peters ▴ 180
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289
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Answer: Answer: CombineArrays for EPIC and EPIC V2
4 weeks ago Tim Peters ▴ 180
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1.4k
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Answer: Answer: How to get DMR for Infinium methylation EPIC v2
4 weeks ago Tim Peters ▴ 180
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334
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Answer: Answer: unable to access Annotationhub latest record
4 weeks ago Tim Peters ▴ 180
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527
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Answer: Answer: EPIC array hg38 annotation?
12 weeks ago Tim Peters ▴ 180
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3.8k
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Comment: Comment: bug in cpg.annotate() and DMR.plot: bad defaults for what and arraytype argument
3 months ago Tim Peters ▴ 180
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1.2k
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Comment: Comment: Why is DMRcate not available for Bioconductor version 3.18?
4 months ago Tim Peters ▴ 180
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1.2k
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Comment: Comment: Why is DMRcate not available for Bioconductor version 3.18?
5 months ago Tim Peters ▴ 180
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482
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Answer: Answer: dmrcate needs at least two non-NA values to interpolate
8 months ago Tim Peters ▴ 180
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1.1k
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Comment: Comment: cpg.annotate() in DMRcate error
12 months ago Tim Peters ▴ 180
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1.1k
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Answer: Answer: cpg.annotate() in DMRcate error
12 months ago Tim Peters ▴ 180
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974
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Answer: Answer: DMRcate: how to compare two comparisons and whether replicate is necessary
2.6 years ago Tim Peters ▴ 180
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1.0k
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Answer: A: Is it possible to run DMRcate directly with genomic positions instead of probe n
3.6 years ago Tim Peters ▴ 180
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1.3k
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Comment: C: Find genes in pathways enrichment
3.7 years ago Tim Peters ▴ 180
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794
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Comment: C: The smoothed Y statistic is far elevated from limma Y statistic, and parameter "
3.8 years ago Tim Peters ▴ 180
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2
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1.3k
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Comment: C: Find genes in pathways enrichment
3.8 years ago Tim Peters ▴ 180
1
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3.0k
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Comment: C: DMRcate Error in if (nsig == 0) { : missing value where TRUE/FALSE needed
3.9 years ago Tim Peters ▴ 180
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1.8k
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Comment: C: extract CpGs from DMRcate results
4.0 years ago Tim Peters ▴ 180
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1.8k
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Comment: C: extract CpGs from DMRcate results
4.0 years ago Tim Peters ▴ 180
1
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1.8k
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Answer: A: extract CpGs from DMRcate results
4.0 years ago Tim Peters ▴ 180
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1.4k
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Comment: C: Significant DMRs in genes with no single significant CpG using limma
4.7 years ago Tim Peters ▴ 180
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1.4k
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Answer: A: Significant DMRs in genes with no single significant CpG using limma
4.7 years ago Tim Peters ▴ 180
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4.9k
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Comment: C: DMRcate results cg ID of significant DMR
4.7 years ago Tim Peters ▴ 180
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4.9k
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Comment: C: DMRcate results cg ID of significant DMR
4.7 years ago Tim Peters ▴ 180
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1.2k
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Comment: C: cpg.annotate model requirements
4.8 years ago Tim Peters ▴ 180
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3.1k
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Comment: C: DMRcate: incorporating covariates to find DMRs in methylation data?
5.3 years ago • updated 5.1 years ago Tim Peters ▴ 180
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1.6k
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Comment: C: DMRcate package :How to find the gene associated with coordinate
5.8 years ago Tim Peters ▴ 180
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1.6k
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Comment: C: DMRcate package :How to find the gene associated with coordinate
5.8 years ago Tim Peters ▴ 180
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1
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1.9k
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Comment: C: Bumphunting for longitudinal data
6.0 years ago Tim Peters ▴ 180
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1.9k
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Answer: A: Bumphunting for longitudinal data
6.0 years ago Tim Peters ▴ 180
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4.9k
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Comment: C: DMRcate results cg ID of significant DMR
6.5 years ago Tim Peters ▴ 180
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1
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4.9k
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Comment: C: DMRcate results cg ID of significant DMR
6.5 years ago Tim Peters ▴ 180
1
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1
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1.5k
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Answer: A: DMRcate results file ordered by genomic location and not Stouffer p-val?
6.9 years ago Tim Peters ▴ 180
0
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2
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3.8k
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Answer: A: bug in cpg.annotate() and DMR.plot: bad defaults for what and arraytype argument
7.1 years ago Tim Peters ▴ 180
0
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1
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3.8k
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Comment: C: bug in cpg.annotate() and DMR.plot: bad defaults for what and arraytype argument
7.1 years ago Tim Peters ▴ 180
0
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1
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3.8k
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Answer: A: bug in cpg.annotate() and DMR.plot: bad defaults for what and arraytype argument
7.1 years ago Tim Peters ▴ 180
0
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1
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3.8k
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Answer: A: bug in cpg.annotate() and DMR.plot: bad defaults for what and arraytype argument
7.1 years ago Tim Peters ▴ 180
0
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0
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3.0k
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Answer: A: minfi, lumi, methylumi, DMRcate installation error
7.1 years ago Tim Peters ▴ 180
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0
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1.5k
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Answer: A: DMRcate: Scaling factor for bandwidth
7.3 years ago Tim Peters ▴ 180
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0
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1.4k
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Answer: A: DMRcate DMR.plot Turn Off Group Means
7.3 years ago Tim Peters ▴ 180
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1
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1.1k
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Answer: A: DMRcate error in extractCoords function
7.3 years ago Tim Peters ▴ 180
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0
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986
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Answer: A: Betacutoff is not used in dmrcate function.
7.3 years ago Tim Peters ▴ 180
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0
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19k
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Answer: A: dmrcate(): Error in `$<-.data.frame`(`*tmp*`, "sig", value = logical(0)) : repla
7.3 years ago Tim Peters ▴ 180
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0
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19k
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Answer: A: dmrcate(): Error in `$<-.data.frame`(`*tmp*`, "sig", value = logical(0)) : repla
7.5 years ago Tim Peters ▴ 180
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19k
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Answer: A: dmrcate(): Error in `$<-.data.frame`(`*tmp*`, "sig", value = logical(0)) : repla
7.5 years ago Tim Peters ▴ 180
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1
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19k
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Answer: A: dmrcate(): Error in `$<-.data.frame`(`*tmp*`, "sig", value = logical(0)) : repla
7.5 years ago Tim Peters ▴ 180
0
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1
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2.2k
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Comment: C: DMRcate cpg.annotate error: "Error in data.frame"
7.8 years ago Tim Peters ▴ 180
1
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1
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2.3k
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Answer: A: DMRcate results meanpvals
7.8 years ago Tim Peters ▴ 180
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1
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2.3k
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Comment: C: DMRcate results meanpvals
7.8 years ago Tim Peters ▴ 180
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