User: Aditya B.

gravatar for Aditya B.
Aditya B.40
Reputation:
40
Status:
New User
Location:
Belgium
Last seen:
2 months, 3 weeks ago
Joined:
3 years, 7 months ago
Email:
b************@gmail.com

Posts by Aditya B.

<prev • 16 results • page 1 of 2 • next >
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targetscan.Hs.eg.db: update to targetscan 7.1 (2016) ?
... Dear Gabor and James, thx for targetscan.Hs.eg.db.  The package contains Targetscan 6.2 (2012). Any plan to update to TargetScan 7.1 (2016)? ...
targetscan targetscan.hs.eg.db written 13 months ago by Aditya B.40
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performance of limma gene set analysis in relation to Tarca et al. (2013)
... Dear Gordon, First of all: thanks a lot for the limma package, it's absolutely great and I am very grateful to you for having created such a useful piece of software. What I wanted to ask you is this: I recently came across Adi Tarca's publication which compares the performance of different  gene ...
genesetenrichment limma written 2.8 years ago by Aditya B.40 • updated 2.8 years ago by Steve Lianoglou12k
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Comment: C: Best way to convert uniprot accessions to entrez gene identifiers in R
... Thank you so much James! ...
written 3.3 years ago by Aditya B.40
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Comment: C: Best way to convert uniprot accessions to entrez gene identifiers in R
... Yep, my package has a dependency on the functionality we have been discussing here ...
written 3.3 years ago by Aditya B.40
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Comment: C: Best way to convert uniprot accessions to entrez gene identifiers in R
... Small additional question: should I use import org.Hs.eg.db importFrom AnnotationDbi select or importFrom org.Hs.eg.db org.Hs.eg.db importFrom AnnotationDbi select   ...
written 3.3 years ago by Aditya B.40
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Comment: C: Best way to convert uniprot accessions to entrez gene identifiers in R
... Thanks James! Love your 'cool kids' motivation to switch to the new interface :-). Will definitely do! ...
written 3.3 years ago by Aditya B.40
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Comment: C: Best way to convert uniprot accessions to entrez gene identifiers in R
... Just discovered revmap() ...
written 3.3 years ago by Aditya B.40
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Best way to convert uniprot accessions to entrez gene identifiers in R
... What is the best way to convert uniprot accessions to entrez gene identifiers? What is the best way to reverse the map org.Hs.eg.db::org.Hs.egUNIPROT ? Is there any better approach (a pity there is no 'org.Hs.uniprot.db' package)? ...
org.hs.eg.db uniprot accessions entrez gene identifiers written 3.3 years ago by Aditya B.40 • updated 3.3 years ago by James W. MacDonald48k
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Answer: A: Error: hgu95av2PFAM is defunct
... The issue has been fixed in the latest version of Architect. ...
written 3.4 years ago by Aditya B.40
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Comment: C: Error: hgu95av2PFAM is defunct
... Thanks Martin, I keep having the error after loading R in a fresh session. Traceback tells me: > traceback() 3: stop(paste(msg, collapse = ""), call. = FALSE, domain = NA) 2: .Defunct(msg = msg) 1: (function () { if (grepl("PFAM", x)) { bimapName <- paste0(prefix, "PFAM ...
written 3.4 years ago by Aditya B.40

Latest awards to Aditya B.

Popular Question 2.7 years ago, created a question with more than 1,000 views. For Best way to convert uniprot accessions to entrez gene identifiers in R
Scholar 3.4 years ago, created an answer that has been accepted. For A: DAVIDWebService$new(): Error: .jinit(...) == 0 is not TRUE
Scholar 3.6 years ago, created an answer that has been accepted. For A: DAVIDWebService$new(): Error: .jinit(...) == 0 is not TRUE

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