User: Aditya B.

gravatar for Aditya B.
Aditya B.40
Reputation:
40
Status:
New User
Location:
Belgium
Last seen:
5 days, 5 hours ago
Joined:
2 years, 7 months ago
Email:
b************@gmail.com

Posts by Aditya B.

<prev • 16 results • page 1 of 2 • next >
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targetscan.Hs.eg.db: update to targetscan 7.1 (2016) ?
... Dear Gabor and James, thx for targetscan.Hs.eg.db.  The package contains Targetscan 6.2 (2012). Any plan to update to TargetScan 7.1 (2016)? ...
targetscan targetscan.hs.eg.db written 5 days ago by Aditya B.40
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performance of limma gene set analysis in relation to Tarca et al. (2013)
... Dear Gordon, First of all: thanks a lot for the limma package, it's absolutely great and I am very grateful to you for having created such a useful piece of software. What I wanted to ask you is this: I recently came across Adi Tarca's publication which compares the performance of different  gene ...
genesetenrichment limma written 20 months ago by Aditya B.40 • updated 20 months ago by Steve Lianoglou12k
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Comment: C: Best way to convert uniprot accessions to entrez gene identifiers in R
... Thank you so much James! ...
written 2.2 years ago by Aditya B.40
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Comment: C: Best way to convert uniprot accessions to entrez gene identifiers in R
... Yep, my package has a dependency on the functionality we have been discussing here ...
written 2.2 years ago by Aditya B.40
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Comment: C: Best way to convert uniprot accessions to entrez gene identifiers in R
... Small additional question: should I use import org.Hs.eg.db importFrom AnnotationDbi select or importFrom org.Hs.eg.db org.Hs.eg.db importFrom AnnotationDbi select   ...
written 2.2 years ago by Aditya B.40
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Comment: C: Best way to convert uniprot accessions to entrez gene identifiers in R
... Thanks James! Love your 'cool kids' motivation to switch to the new interface :-). Will definitely do! ...
written 2.2 years ago by Aditya B.40
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Comment: C: Best way to convert uniprot accessions to entrez gene identifiers in R
... Just discovered revmap() ...
written 2.2 years ago by Aditya B.40
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Best way to convert uniprot accessions to entrez gene identifiers in R
... What is the best way to convert uniprot accessions to entrez gene identifiers? What is the best way to reverse the map org.Hs.eg.db::org.Hs.egUNIPROT ? Is there any better approach (a pity there is no 'org.Hs.uniprot.db' package)? ...
org.hs.eg.db uniprot accessions entrez gene identifiers written 2.2 years ago by Aditya B.40 • updated 2.2 years ago by James W. MacDonald45k
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Answer: A: Error: hgu95av2PFAM is defunct
... The issue has been fixed in the latest version of Architect. ...
written 2.3 years ago by Aditya B.40
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Comment: C: Error: hgu95av2PFAM is defunct
... Thanks Martin, I keep having the error after loading R in a fresh session. Traceback tells me: > traceback() 3: stop(paste(msg, collapse = ""), call. = FALSE, domain = NA) 2: .Defunct(msg = msg) 1: (function () { if (grepl("PFAM", x)) { bimapName <- paste0(prefix, "PFAM ...
written 2.4 years ago by Aditya B.40

Latest awards to Aditya B.

Popular Question 19 months ago, created a question with more than 1,000 views. For Best way to convert uniprot accessions to entrez gene identifiers in R
Scholar 2.3 years ago, created an answer that has been accepted. For A: DAVIDWebService$new(): Error: .jinit(...) == 0 is not TRUE
Scholar 2.6 years ago, created an answer that has been accepted. For A: DAVIDWebService$new(): Error: .jinit(...) == 0 is not TRUE

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