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Comment:
C: gene Isoforms quantification using RNA-seq data
4.7 years ago
chris86
▴ 420
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Comment:
C: How to apply a linear mixed model onto an RNA-Seq data?
4.8 years ago
chris86
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22k
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Comment:
C: Variance stabilising transformation for machine learning
4.8 years ago
chris86
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22k
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C: Variance stabilising transformation for machine learning
4.8 years ago
chris86
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773
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Comment:
C: Limma classical interaction model question
4.9 years ago
chris86
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773
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Comment:
C: Limma classical interaction model question
4.9 years ago
chris86
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1
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2.3k
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Comment:
C: Error in reading data on isoformswitchanalyzeR
5.1 years ago
chris86
▴ 420
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2.3k
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Comment:
C: Error in reading data on isoformswitchanalyzeR
5.1 years ago
chris86
▴ 420
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1
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2.3k
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Comment:
C: Error in reading data on isoformswitchanalyzeR
5.1 years ago
chris86
▴ 420
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1
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2.3k
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Comment:
C: Error in reading data on isoformswitchanalyzeR
5.1 years ago
chris86
▴ 420
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1.6k
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Comment:
C: Transcript variant analysis on Salmon output
5.1 years ago
chris86
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1.6k
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Comment:
C: Transcript variant analysis on Salmon output
5.1 years ago
chris86
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807
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Comment:
C: DEXSeq With Reduced Annotations
5.2 years ago
chris86
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Comment:
C: GSEA for RNA-seq analysis
5.8 years ago
chris86
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1.8k
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Comment:
C: Simple differential expression analysis for 2 groups
5.8 years ago
chris86
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1.8k
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Comment:
C: Simple differential expression analysis for 2 groups
5.8 years ago
chris86
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827
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Comment:
C: Dseq2 gives the same results no matter the condition ???
5.9 years ago
chris86
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1.3k
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Comment:
C: Better to use rlog or vst transformation for data quality assessment of differen
6.0 years ago
chris86
▴ 420
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2.4k
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Comment:
C: novice: building gene co-expression network using RNA-Seq data
6.1 years ago
chris86
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824
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C: Update from developers branch of bioconductor packages
6.1 years ago
chris86
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1.2k
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Comment:
C: Clustering of samples based on specific gene sets
6.2 years ago
chris86
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1.2k
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Comment:
C: Clustering of samples based on specific gene sets
6.2 years ago
chris86
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965
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Comment:
C: Paired factorial design model in limma
6.4 years ago
chris86
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1.4k
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Comment:
C: apply Kruskall or other non-parametric test for multiple comparisons
6.5 years ago
chris86
▴ 420
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1.4k
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Comment:
C: apply Kruskall or other non-parametric test for multiple comparisons
6.5 years ago
chris86
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1
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1.8k
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Comment:
C: Probe summerization of Human HT-12 V4 BeadChip arrays
6.5 years ago
chris86
▴ 420
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2.0k
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Comment:
C: Differential expression between multiple groups
6.5 years ago
chris86
▴ 420
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695
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Comment:
C: Diferential expresion analysis between different microarray platforms
6.5 years ago
chris86
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1.4k
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Comment:
C: Differential gene expression of longitudinal data
6.5 years ago
chris86
▴ 420
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4.4k
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Comment:
C: Heat MAP TPM
6.6 years ago
chris86
▴ 420
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1.3k
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Comment:
C: Some doubts about the limma package
6.7 years ago
chris86
▴ 420
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1.3k
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Comment:
C: Some doubts about the limma package
6.7 years ago
chris86
▴ 420
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916
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Comment:
C: Batch effect between paired and single ended reads
6.9 years ago
chris86
▴ 420
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4.1k
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Comment:
C: illumina ht-12 v4 expression beadchip
7.2 years ago
chris86
▴ 420
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1.1k
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Comment:
C: Negative bionomial model (test) vs T test in EBseq or DEseq2
7.3 years ago
chris86
▴ 420
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2
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11k
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Comment:
C: Possible ways of performing differential gene expression and analysis of RNA-Seq
7.4 years ago
chris86
▴ 420
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0
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11k
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Comment:
C: Possible ways of performing differential gene expression and analysis of RNA-Seq
7.4 years ago
chris86
▴ 420
1
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11k
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Comment:
C: Possible ways of performing differential gene expression and analysis of RNA-Seq
7.4 years ago
chris86
▴ 420
1
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0
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816
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Comment:
C: Finding specific modules compared to consensus modules; cut-off?
7.4 years ago
chris86
▴ 420
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3.6k
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Comment:
C: GO enrichment comparison with other programs
7.4 years ago
chris86
▴ 420
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2
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3.6k
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Comment:
C: GO enrichment comparison with other programs
7.4 years ago
chris86
▴ 420
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1
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956
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Comment:
C: Problem with Combat batch adjustment
7.5 years ago
chris86
▴ 420
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1.3k
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Comment:
C: ConsensusClusterPlus - function "calcICL" - How the samples are ordered in the p
7.5 years ago
chris86
▴ 420
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2.3k
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Comment:
C: Test whether expression levels of two gene sets are significantly different
7.5 years ago
chris86
▴ 420
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0
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2.3k
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Comment:
C: Test whether expression levels of two gene sets are significantly different
7.5 years ago
chris86
▴ 420
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0
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2.2k
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Comment:
C: How to combine replicates creating heatmap?
7.6 years ago
chris86
▴ 420
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0
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1.1k
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Comment:
C: the output DEGs of limma analyzing RNA-seq data is just 1/3 of those by Tophat-C
7.6 years ago
chris86
▴ 420
0
votes
1
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817
views
Comment:
C: background correction for illumina array files
7.6 years ago
chris86
▴ 420
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0
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1.6k
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Comment:
C: Question about seed in ConsensusClusterPlus, can't repeat the result
7.6 years ago
chris86
▴ 420
0
votes
0
replies
1.0k
views
Comment:
C: How to analyze unannotated lncRNA using RNA-seq data?
7.6 years ago
chris86
▴ 420
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