Showing : Aspli • reset
6
votes
10
replies
1.7k
views
ASpli: jCounts() Error in av[at] <- a[at] : NAs are not allowed in subscripted assignments
ASpli
updated 2.7 years ago by • 0 • written 3.0 years ago by ▴ 20
5
votes
6
replies
886
views
ASpli checks fail on Linux due to missing dependency to statmod
ASpli
updated 9 months ago by 50k • written 9 months ago by ▴ 10
3
votes
2
replies
1.1k
views
ASpli readCounts never ends!
aspli readCounts rna-seq alternative splicing AS
5.3 years ago fernandalpcosta ▴ 10
2
votes
2
replies
1.4k
views
ASpli ERROR during the counting step
ASpli rnaseq
updated 6.2 years ago by ▴ 10 • written 6.5 years ago by ▴ 10
1
vote
11
replies
2.0k
views
Aspli: error with gbCounts
Aspli ASpli
3.2 years ago • updated 3.1 years ago jbono ▴ 10
1
vote
3
replies
1.0k
views
ASpli error message
ASpli
updated 2.3 years ago by ▴ 50 • written 3.1 years ago by ▴ 50
0
votes
0
replies
963
views
ASpli Package: Problem with readCounts() function, no Junctions analysed.
rnaseq alternative splicing ASpli
5.5 years ago nicolas.guyon2 • 0
0
votes
1
reply
812
views
ASpli package function plotGenomicRegions fails in windows
ASpli plotGenomicRegions
updated 3.8 years ago by ▴ 50 • written 4.8 years ago by • 0
0
votes
1
reply
614
views
function plotgenomicregions does not appear in the aspli package installed in windows
software error aspli plotgenomicregions windows
4.1 years ago joanmarquez21 • 0
0
votes
0
replies
1.1k
views
Running ASpli on R results in "Error: vector memory exhausted (limit reached?)"
aspli rstudio
6.0 years ago arphatak • 0
0
votes
3
replies
3.4k
views
ASpli: Error in h(simpleError(msg, call)) : error in evaluating the argument 'x' in selecting a method for function 'sort': 'start' or 'end' canno…
ASpli
updated 8 months ago by • 0 • written 19 months ago by • 0
0
votes
0
replies
826
views
ASPLI (RNAseq AS) R package error
rnaseq ASPLI
5.9 years ago dina.hesham139 • 0
0
votes
1
reply
1.6k
views
ASpli: Error in h(simpleError(msg, call))
ASpli
updated 22 months ago by • 0 • written 2.8 years ago by • 0
0
votes
0
replies
263
views
Error in set(x, j = name, value = value) : Supplied 52 items to be assigned to 55 items of column 'locus'. If you wish to 'recycle' the RHS please…
ASpli
11 weeks ago vipul14 • 0
0
votes
1
reply
671
views
Splicing analysis with ASpli package gives an error when I use binGenome function.
S4Vectors Aspli
updated 15 months ago by • 0 • written 15 months ago by • 0
0
votes
0
replies
108
views
I am trying to detect alternative splicing.
ASpli
4 weeks ago Sebashish • 0
0
votes
0
replies
623
views
ASpli package gives an error in jCounts function and suggest a parameter change in granges()
ASpli alterna AlternativeSplicing
2.3 years ago hamza_karakurt ▴ 50
0
votes
1
reply
910
views
Splicing analysis with ASpli
ASpli
updated 6.2 years ago by ★ 1.5k • written 6.2 years ago by ▴ 30
0
votes
0
replies
903
views
ASpli AsDiscover error
R alternative splicing ASpli AsDiscover
5.4 years ago abdul rawoof ▴ 60
19 results • Page 1 of 1
Recent ...
Replies
Answer: Errors in chromosome annotation-biomaRt by James W. MacDonald 65k
If you are just using HGNC symbols for the lookup, and you are trying to get NCBI IDs, then I wouldn't use `biomaRt` because it's based on …
Comment: Help with ENmix readidat by James W. MacDonald 65k
Please don't add to posts from two years ago. Instead make a new post. Also, please read the help page for `readidat`. The only reason to …
Comment: LRT, more than two conditions and pairwise comparisons by James W. MacDonald 65k
In that case, probably easiest to subset to the groups being compared.
Comment: Help with ENmix readidat by minardsmitha ▴ 10
Did you figure this out? I have the same issue.
Comment: LRT, more than two conditions and pairwise comparisons by boczniak767 ▴ 720
Thank you for response, apparently I still don't know much about statistics. In fact I want to campare time-profiles [and the LRT has been …
Votes
Comment: DESeq2- Mysterious interaction suppresses DEGs
Answer: DESeq2- Mysterious interaction suppresses DEGs
Answer: Subsetting RNAseq data | voomaByGroup()
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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