Bioconductor NOISeq

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494

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NOISeq withoutreplicate Noiseq

updated 9 months ago by ATpoint ★ 4.1k • written 9 months ago by Rutuja • 0

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773

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RNAseq RNASeqData NOISeq

23 months ago Pratibha ▴ 10

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922

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DESeq2 NOISeq edgeR

updated 3.4 years ago by ATpoint ★ 4.1k • written 3.4 years ago by Themis • 0

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1.7k

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deseq2 noiseq lowcounts rnaseq

updated 2.3 years ago by Michael Love 42k • written 3.7 years ago by andreia ▴ 10

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690

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noiseq RNA-seq quality control

4.7 years ago ag1805x ▴ 80

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667

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software error NOISeq

4.9 years ago jledmondson • 0

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844

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noiseq rsubread tophat bowtie bowtie2

4.9 years ago Marcelo Laia ▴ 450

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969

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noiseq logfoldchange

6.1 years ago Aurora ▴ 20

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1.0k

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R noiseq data.frame

6.3 years ago aokoro • 0

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1.6k

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complexheatmap Rstudio NOISeq

6.7 years ago Luiz • 0

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1.5k

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rnaseq de analysis gene filtering noiseq

updated 6.8 years ago by James W. MacDonald 65k • written 6.8 years ago by Mau ▴ 50

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3.7k

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deseq2 cqn noiseq

updated 7.0 years ago by Michael Love 42k • written 7.0 years ago by glmazzo ▴ 10

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1.3k

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noiseq batch effect ARSyNseq

8.6 years ago lina.faller ▴ 10

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1.0k

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RNASeq NOISeq RNASeq NOISeq

11.2 years ago Guest User ★ 13k

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2.7k

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NOISeq NOISeq

updated 11.6 years ago by Dan Tenenbaum ★ 8.2k • written 11.6 years ago by Guest User ★ 13k

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2.0k

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NOISeq NOISeq

updated 11.6 years ago by Sean Davis 21k • written 11.6 years ago by Fatemehsadat Seyednasrollah ▴ 260

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1.1k

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NOISeq NOISeq

12.2 years ago Guest User ★ 13k

17 results • Page 1 of 1

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Comment: all variables in design formula must be columns in colData (Deseq2) error by Galina • 0

thank you!

Comment: all variables in design formula must be columns in colData (Deseq2) error by ATpoint ★ 4.1k

coldata_rat <- data.frame(conditions=..., batch=...)

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by robersy • 0

Thank you all for your comments. I will follow your suggestions.

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0

Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by Ken C • 0

Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…

Votes

biomaRt not working - lazy table error

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

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