Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : all
1
vote
1
reply
119
views
Answer: Answer: How to correctly adjust for gender in edgeR
3 days ago Gordon Smyth 50k
1
vote
0
replies
238
views
Comment: Comment: How to approach time course RNAseq data? Seeing 80% DE genes in timepoint groups
4 days ago Gordon Smyth 50k
0
votes
1
reply
238
views
Answer: Answer: How to approach time course RNAseq data? Seeing 80% DE genes in timepoint groups
5 days ago Gordon Smyth 50k
1
vote
1
reply
266
views
Answer: Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
9 days ago Gordon Smyth 50k
2
votes
0
replies
307
views
Comment: Comment: Log-cpm values from limma
9 days ago • updated 8 days ago Gordon Smyth 50k
1
vote
1
reply
319
views
Comment: Comment: Method to find pathways different between 2 groups
11 days ago Gordon Smyth 50k
1
vote
1
reply
319
views
Answer: Answer: Method to find pathways different between 2 groups
12 days ago Gordon Smyth 50k
0
votes
0
replies
267
views
Comment: Comment: package goseq seems to be not available on the latest version of R
13 days ago • updated 12 days ago Gordon Smyth 50k
0
votes
0
replies
403
views
Answer: Answer: limma Intercept vs No-intercept models completely changing DMR results?
15 days ago • updated 14 days ago Gordon Smyth 50k
0
votes
1
reply
267
views
Answer: Answer: package goseq seems to be not available on the latest version of R
15 days ago • updated 14 days ago Gordon Smyth 50k
0
votes
0
replies
175
views
Answer: Answer: NEED FOR NESSASORY HELP
16 days ago Gordon Smyth 50k
0
votes
0
replies
155
views
Answer: Answer: Gene-by-sample covariates in limma
16 days ago Gordon Smyth 50k
3
votes
2
replies
624
views
Answer: Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
16 days ago • updated 15 days ago Gordon Smyth 50k
1
vote
1
reply
1.3k
views
Comment: Comment: Why p value inconsistent when using different number of pathway score?
19 days ago Gordon Smyth 50k
1
vote
1
reply
214
views
Answer: Answer: Improving the design matrices vignette in RNAseq123
22 days ago Gordon Smyth 50k
1
vote
0
replies
204
views
Answer: Answer: Citation for edgeR user guide
25 days ago Gordon Smyth 50k
0
votes
1
reply
190
views
Answer: Answer: limma-voom: Calculate the log-fold change in gene expression within a sample
26 days ago Gordon Smyth 50k
1
vote
1
reply
469
views
Comment: Comment: FilterByExpr low counts with small sample size
27 days ago Gordon Smyth 50k
1
vote
1
reply
1.3k
views
Comment: Comment: Why p value inconsistent when using different number of pathway score?
28 days ago Gordon Smyth 50k
2
votes
1
reply
1.3k
views
Answer: Answer: Why p value inconsistent when using different number of pathway score?
28 days ago • updated 27 days ago Gordon Smyth 50k
1
vote
0
replies
1.3k
views
Comment: Comment: Why p value inconsistent when using different number of pathway score?
28 days ago Gordon Smyth 50k
0
votes
1
reply
239
views
Answer: Answer: RNAseq:Technical replicates from different batches
29 days ago Gordon Smyth 50k
0
votes
0
replies
212
views
Comment: Comment: Finding DEGs by using edgeR
29 days ago Gordon Smyth 50k
3
votes
1
reply
469
views
Answer: Answer: FilterByExpr low counts with small sample size
29 days ago Gordon Smyth 50k
0
votes
1
reply
147
views
Answer: Answer: How to make DGEList and design matrix by edgeR package
29 days ago Gordon Smyth 50k
0
votes
1
reply
212
views
Answer: Answer: Finding DEGs by using edgeR
29 days ago Gordon Smyth 50k
3
votes
1
reply
307
views
Answer: Answer: Log-cpm values from limma
29 days ago Gordon Smyth 50k
0
votes
1
reply
469
views
Comment: Comment: FilterByExpr low counts with small sample size
4 weeks ago Gordon Smyth 50k
0
votes
0
replies
1.3k
views
Comment: Comment: Batch correction and repeated measures
4 weeks ago Gordon Smyth 50k
0
votes
1
reply
363
views
Comment: Comment: Methylation Analysis experiment design using Limma
4 weeks ago Gordon Smyth 50k
0
votes
1
reply
363
views
Answer: Answer: Methylation Analysis experiment design using Limma
4 weeks ago Gordon Smyth 50k
1
vote
1
reply
975
views
Comment: Comment: Light difference when using coef vs omit a group when compare 3 groups.
4 weeks ago Gordon Smyth 50k
1
vote
1
reply
975
views
Comment: Comment: Light difference when using coef vs omit a group when compare 3 groups.
4 weeks ago Gordon Smyth 50k
1
vote
0
replies
208
views
Answer: Answer: Differentially expressed genes in monocle pseudotime
4 weeks ago Gordon Smyth 50k
0
votes
0
replies
368
views
Answer: Answer: permutation test in edgeR
4 weeks ago • updated 27 days ago Gordon Smyth 50k
0
votes
0
replies
369
views
Answer: Answer: Why is my gene not significantly differentially expressed?
4 weeks ago Gordon Smyth 50k
1
vote
2
replies
975
views
Comment: Comment: Light difference when using coef vs omit a group when compare 3 groups.
5 weeks ago • updated 4 weeks ago Gordon Smyth 50k
2
votes
1
reply
975
views
Answer: Answer: Light difference when using coef vs omit a group when compare 3 groups.
5 weeks ago Gordon Smyth 50k
0
votes
0
replies
186
views
Answer: Answer: Limma design matrix only showing 3/4 treatments?
6 weeks ago Gordon Smyth 50k
1
vote
1
reply
2.0k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
6 weeks ago Gordon Smyth 50k
1
vote
0
replies
2.0k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
6 weeks ago Gordon Smyth 50k
0
votes
0
replies
266
views
Comment: Comment: Regressing out batch effects
6 weeks ago Gordon Smyth 50k
1
vote
1
reply
2.0k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
6 weeks ago Gordon Smyth 50k
0
votes
0
replies
990
views
Comment: Comment: limma models out of memory issue on Slurm HPC
6 weeks ago Gordon Smyth 50k
0
votes
1
reply
463
views
Comment: Comment: Using a change in a continuous explanatory variable to test changes in gene expr
6 weeks ago Gordon Smyth 50k
0
votes
1
reply
990
views
Comment: Comment: limma models out of memory issue on Slurm HPC
6 weeks ago Gordon Smyth 50k
1
vote
1
reply
463
views
Answer: Answer: Using a change in a continuous explanatory variable to test changes in gene expr
6 weeks ago Gordon Smyth 50k
0
votes
1
reply
197
views
Answer: Answer: edgeR analysis: glm functions and offset matrix
6 weeks ago Gordon Smyth 50k
1
vote
0
replies
990
views
Comment: Comment: limma models out of memory issue on Slurm HPC
6 weeks ago Gordon Smyth 50k
2
votes
1
reply
990
views
Comment: Comment: limma models out of memory issue on Slurm HPC
6 weeks ago Gordon Smyth 50k
5,094 results • Page 1 of 102
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6