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6.5k
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Answer:
Answer: Interpretation of Log 2 fold change
3.0 years ago
James W. MacDonald
67k
2
votes
1
reply
2.1k
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Comment:
Comment: Model matrix not full rank, then
3.0 years ago
James W. MacDonald
67k
0
votes
0
replies
6.0k
views
Comment:
Comment: How featureCounts define the gene length
3.0 years ago
James W. MacDonald
67k
2
votes
1
reply
2.1k
views
Answer:
Answer: Model matrix not full rank, then
3.0 years ago
James W. MacDonald
67k
0
votes
0
replies
994
views
Answer:
Answer: Question about normalizing and removing batch effects from bulk RNA-seq data fro
3.0 years ago
James W. MacDonald
67k
0
votes
1
reply
806
views
Answer:
Answer: What's the difference between formatC() and round() function when used to limite
3.0 years ago
James W. MacDonald
67k
0
votes
0
replies
2.0k
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Comment:
Comment: biomaRt error: database disk image is malformed
3.0 years ago
James W. MacDonald
67k
0
votes
0
replies
950
views
Answer:
Answer: Get CHR & POS for a list of SNP rs ids (>1M)
3.0 years ago
James W. MacDonald
67k
3
votes
2
replies
2.0k
views
Answer:
Answer: biomaRt error: database disk image is malformed
3.0 years ago
James W. MacDonald
67k
0
votes
0
replies
1.1k
views
Comment:
Comment: How to use GO.db select on *ANCESTOR *CHILDREN *PARENTS etc.
3.0 years ago
James W. MacDonald
67k
0
votes
1
reply
3.5k
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Answer:
Answer: DESeq2 error in design~ code
3.0 years ago
James W. MacDonald
67k
1
vote
0
replies
1.3k
views
Comment:
Comment: Microarray - Illumina Metadata
3.0 years ago
James W. MacDonald
67k
0
votes
1
reply
1.3k
views
Answer:
Answer: Microarray - Illumina Metadata
3.0 years ago
James W. MacDonald
67k
0
votes
1
reply
1.3k
views
Answer:
Answer: Reading vcf file with readVcf
3.0 years ago
James W. MacDonald
67k
0
votes
0
replies
849
views
Answer:
Answer: Genic annotations of whole hg38
3.0 years ago
James W. MacDonald
67k
0
votes
1
reply
6.8k
views
Comment:
Comment: At least one covariate is confounded with batch! Please remove confounded covari
3.0 years ago
James W. MacDonald
67k
0
votes
1
reply
6.8k
views
Answer:
Answer: At least one covariate is confounded with batch! Please remove confounded covari
3.1 years ago
James W. MacDonald
67k
0
votes
0
replies
1.2k
views
Answer:
Answer: Error in `*tmp*`$samples : $ operator is invalid for atomic vectors
3.1 years ago
James W. MacDonald
67k
0
votes
1
reply
2.0k
views
Answer:
Answer: Returning to edgeR version 3.26.1?
3.1 years ago
James W. MacDonald
67k
0
votes
0
replies
732
views
Answer:
Answer: Information about locateVariants function
3.1 years ago
James W. MacDonald
67k
3
votes
0
replies
2.5k
views
Answer:
Answer: Converting between UCSC id and gene symbol with bioconductor annotation resource
3.1 years ago
James W. MacDonald
67k
0
votes
0
replies
2.4k
views
Answer:
Answer: Unable to Install packages in R
3.1 years ago
James W. MacDonald
67k
1
vote
0
replies
1.4k
views
Answer:
Answer: Extracting a list of genes from the Gene Expression Omnibus with Geoquery.
3.1 years ago
James W. MacDonald
67k
0
votes
0
replies
2.5k
views
Comment:
Comment: How to test full design vs a reduced design in limma?
3.1 years ago
James W. MacDonald
67k
0
votes
0
replies
1.4k
views
Comment:
Comment: How to subset GRangesList by seqnames
3.1 years ago
James W. MacDonald
67k
2
votes
1
reply
1.4k
views
Answer:
Answer: How to subset GRangesList by seqnames
3.1 years ago
James W. MacDonald
67k
2
votes
1
reply
2.5k
views
Answer:
Answer: How to test full design vs a reduced design in limma?
3.1 years ago
James W. MacDonald
67k
1
vote
0
replies
1.8k
views
Comment:
Comment: Nanostringdiff - defining contrast values for blocking variables in glm
3.1 years ago
James W. MacDonald
67k
1
vote
1
reply
1.8k
views
Comment:
Comment: Nanostringdiff - defining contrast values for blocking variables in glm
3.1 years ago
James W. MacDonald
67k
0
votes
0
replies
1.7k
views
Answer:
Answer: Gene expression analysis between three different tissues
3.1 years ago
James W. MacDonald
67k
1
vote
0
replies
1.1k
views
Answer:
Answer: Degust: what normalization method does it use
3.1 years ago
James W. MacDonald
67k
1
vote
1
reply
1.8k
views
Comment:
Comment: Nanostringdiff - defining contrast values for blocking variables in glm
3.1 years ago
James W. MacDonald
67k
1
vote
1
reply
1.8k
views
Answer:
Answer: Nanostringdiff - defining contrast values for blocking variables in glm
3.1 years ago
James W. MacDonald
67k
2
votes
1
reply
903
views
Answer:
Answer: How to obtain a GC content file to use in HMMcopy?
3.1 years ago
James W. MacDonald
67k
1
vote
2
replies
2.3k
views
Comment:
Comment: what's the difference between this two AnnotationDbi::select type in GO select
3.1 years ago
James W. MacDonald
67k
0
votes
0
replies
2.3k
views
Comment:
Comment: what's the difference between this two AnnotationDbi::select type in GO select
3.1 years ago
James W. MacDonald
67k
0
votes
2
replies
2.3k
views
Answer:
Answer: what's the difference between this two AnnotationDbi::select type in GO select
3.1 years ago
James W. MacDonald
67k
1
vote
0
replies
731
views
Answer:
Answer: Can we read and plot our own .bed data into the Gviz plotTracks? If yes, then ho
3.1 years ago
James W. MacDonald
67k
0
votes
0
replies
740
views
Answer:
Answer: Clariom-D array - subsetting probes to known genes prior to normalization
3.1 years ago
James W. MacDonald
67k
0
votes
1
reply
1.8k
views
Answer:
Answer: log2FoldChange calculation in DESeq2
3.1 years ago
James W. MacDonald
67k
1
vote
0
replies
973
views
Answer:
Answer: limma: pvalues for coefficients topTable
3.1 years ago
James W. MacDonald
67k
1
vote
1
reply
1.4k
views
Answer:
Answer: The RSQLite package fails to be installed
3.1 years ago
James W. MacDonald
67k
0
votes
0
replies
3.6k
views
Comment:
Comment: transformation of csv file to fasta format with biostrings and r studio
3.1 years ago
James W. MacDonald
67k
0
votes
0
replies
1.2k
views
Answer:
Answer: install GenomicFeatures fail
3.1 years ago
James W. MacDonald
67k
0
votes
2
replies
3.6k
views
Answer:
Answer: transformation of csv file to fasta format with biostrings and r studio
3.1 years ago
James W. MacDonald
67k
0
votes
1
reply
1.6k
views
Comment:
Comment: installation error: Error in setIs(class2, cli, extensionObject = obji, doComple
3.1 years ago
James W. MacDonald
67k
0
votes
1
reply
1.6k
views
Answer:
Answer: installation error: Error in setIs(class2, cli, extensionObject = obji, doComple
3.1 years ago
James W. MacDonald
67k
0
votes
0
replies
1.2k
views
Answer:
Answer: Gviz: change position of transcriptAnnotation
3.1 years ago
James W. MacDonald
67k
0
votes
0
replies
1.1k
views
Comment:
Comment: Not full rank DESeq2
3.2 years ago
James W. MacDonald
67k
0
votes
1
reply
1.4k
views
Answer:
Answer: makeContrasts question
3.2 years ago
James W. MacDonald
67k
8,585 results • Page
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