Appreciated

Created A Post With More Than 5 Votes

Awarded 394 times (see all awards). Earned by the following contributors:
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
Rsubread now available for Windows
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: correcting the batch effects in Limma and SVA
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: How barcode-plot enrichment is calculated?
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: Differential expression analysis starting from TPM data
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: Using voomWithQualityWeights for differential expression analysis.
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: Appropriate ways to filter counts data for voom/limma
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: Fit a multinomial to RNA-seq count data
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: How to remove more than two batches in my data-sets
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: EdgeR cpm: factor of 2 when adjusting library size?
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
Answer: gene dispersion, what does it mean?
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: Normalization methodology in DESeq/DESeq2 vs edgeR
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: Gene symbols on MA-plot
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: Correct assumptions of using limma moderated t-test
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: Nanostring analysis with limma
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: Removing continuous covariate effects in limma analysis
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: voom for spectral counts
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: Confidence intervals on edgeR logFC
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: RNA-Seq, generate batch-free count matrix
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
Differences between limma voom E values and edgeR cpm values?
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
limma moderated t-statistics and B-statistics
Gordon Smyth 50k
3 years, 5 months ago
WEHI, Melbourne, Australia
A: conceptual question about FDR, FDR adjusted p-value and q-value
Gordon Smyth 50k
5 years, 2 months ago
WEHI, Melbourne, Australia
Volcanoplot with limma - RAW P-values or Adj.P-Values
Gordon Smyth 50k
5 years, 2 months ago
WEHI, Melbourne, Australia
non-integer counts for edgeR
Gordon Smyth 50k
5 years, 2 months ago
WEHI, Melbourne, Australia
simultaneous use of robust and weighting methods in limma
Gordon Smyth 50k
5 years, 2 months ago
WEHI, Melbourne, Australia
How barcode-plot enrichment is calculated?
Gordon Smyth 50k
5 years, 2 months ago
WEHI, Melbourne, Australia
Removing continuous covariate effects in limma analysis
Gordon Smyth 50k
5 years, 3 months ago
WEHI, Melbourne, Australia
How barcode-plot enrichment is calculated?
Gordon Smyth 50k
5 years, 3 months ago
WEHI, Melbourne, Australia
Removing continuous covariate effects in limma analysis
Gordon Smyth 50k
5 years, 4 months ago
WEHI, Melbourne, Australia
How barcode-plot enrichment is calculated?
Gordon Smyth 50k
5 years, 6 months ago
WEHI, Melbourne, Australia
How barcode-plot enrichment is calculated?
Gordon Smyth 50k
5 years, 6 months ago
WEHI, Melbourne, Australia
BH vs BY in p.adjust + FDR interpretation
Gordon Smyth 50k
5 years, 7 months ago
WEHI, Melbourne, Australia
BH vs BY in p.adjust + FDR interpretation
Gordon Smyth 50k
6 years, 9 months ago
WEHI, Melbourne, Australia
RNA-Seq, generate batch-free count matrix
Gordon Smyth 50k
6 years, 9 months ago
WEHI, Melbourne, Australia
Fit a multinomial to RNA-seq count data
Gordon Smyth 50k
6 years, 9 months ago
WEHI, Melbourne, Australia
Differential expression of FPKM from RNA-seq data using limma and voom()
Gordon Smyth 50k
6 years, 9 months ago
WEHI, Melbourne, Australia
Differences between limma voom E values and edgeR cpm values?
Gordon Smyth 50k
6 years, 9 months ago
WEHI, Melbourne, Australia
BH vs BY in p.adjust + FDR interpretation
Gordon Smyth 50k
6 years, 9 months ago
WEHI, Melbourne, Australia
BH vs BY in p.adjust + FDR interpretation
73 results • Page 1 of 2
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