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4 years, 8 months ago
Seattle, WA, United States
how to obtain base counts from BAM file at specific genomic coordinates
5 years, 3 months ago
Seattle, WA, United States
how to obtain base counts from BAM file at specific genomic coordinates
5 years, 3 months ago
Seattle, WA, United States
how to obtain base counts from BAM file at specific genomic coordinates
5 years, 7 months ago
Seattle, WA, United States
unique, duplicated, order, etc... on a GRanges object
5 years, 7 months ago
Seattle, WA, United States
BioStrings for current R: RE: BSgenomeForge seed file - seqnames field
5 years, 7 months ago
Seattle, WA, United States
how to obtain base counts from BAM file at specific genomic coordinates
5 years, 10 months ago
Seattle, WA, United States
New Bioconductor package for dbSNP151
6 years, 10 months ago
Seattle, WA, United States
unique, duplicated, order, etc... on a GRanges object
6 years, 10 months ago
Seattle, WA, United States
how to obtain base counts from BAM file at specific genomic coordinates
6 years, 10 months ago
Seattle, WA, United States
overlap regions between two GRanges (or GRangesList)
6 years, 10 months ago
Seattle, WA, United States
Seed file error: RE: BioStrings for current R: RE: BSgenomeForge seed file - seqnames field
8 years ago
Seattle, WA, United States
how to obtain base counts from BAM file at specific genomic coordinates
8 years, 6 months ago
Seattle, WA, United States
'version' is missing error when running makeTxDbPackageFromUCSC
8 years, 10 months ago
Seattle, WA, United States
dbSNP build for R package SNPlocs.Hsapiens.dbSNP.20080617
9 years, 8 months ago
Seattle, WA, United States
subseq with iranges on reverse strand
9 years, 11 months ago
Seattle, WA, United States
UCSC data anomaly in 50638 transcript(s): the cds cumulative length is
10 years, 1 month ago
Seattle, WA, United States
Trying to use BSgenome.Hsapiens.NCBI.GRCh38
10 years, 1 month ago
Seattle, WA, United States
A question about the function readGAlignmentPairs in GenomicRnages package
10 years, 3 months ago
Seattle, WA, United States
I need help making a dcf seed file to encapsulate a genome assembly im using.
10 years, 4 months ago
Seattle, WA, United States
Easy way to convert CharacterList to character, collapsing each element?
10 years, 4 months ago
Seattle, WA, United States
Question about MEDIPS extend parameter : RE: Success: RE: Seed file error: RE: BioStrings for current R: RE: BSgenomeForge seed file - seqnames field
10 years, 6 months ago
Seattle, WA, United States
Fwd: [devteam-bioc] information about genefilter package
10 years, 6 months ago
Seattle, WA, United States
Creat PWM from Alignment with Gaps
10 years, 7 months ago
Seattle, WA, United States
Fwd: BioStrings PairwiseAlignment deletion() insertion() function
11 years, 1 month ago
Seattle, WA, United States
Finding mismatches between reads and reference sequence
11 years, 1 month ago
Seattle, WA, United States
Limit on number of sequence files for forging a BSgenome
11 years, 4 months ago
Seattle, WA, United States
countMatches() (was: table for GenomicRanges)
11 years, 4 months ago
Seattle, WA, United States
Why does a call to "unique" removes a DNAStringSet names?
11 years, 5 months ago
Seattle, WA, United States
IRanges/List oddity: do.call of `c` on a list of IRangesList returns "list" only when the list is named
11 years, 9 months ago
Seattle, WA, United States
Biostring: print sequence alignment to file
12 years, 1 month ago
Seattle, WA, United States
[Hinxton #251937] RE: GenomicFeatures::makeTranscriptDbFromBiomart - BioMart data anomaly: for some transcripts, the cds cumulative length inferred from the exon and UTR info doesn
12 years, 2 months ago
Seattle, WA, United States
homopolymer gap extension penalty in Biostrings
12 years, 3 months ago
Seattle, WA, United States
shift function (GenomicRanges, IRanges), issue with negative start values and circular DNA
12 years, 7 months ago
Seattle, WA, United States
[Bioc-sig-seq] as.data.frame on GRanges object with DNAStringSet in values
12 years, 7 months ago
Seattle, WA, United States
[Bioc-sig-seq] first remove low quality or adaptor
12 years, 9 months ago
Seattle, WA, United States
Fwd: Probe matching using vmatchPDict
12 years, 10 months ago
Seattle, WA, United States
IRanges package: findOverlaps on blobs
13 years, 1 month ago
Seattle, WA, United States
Mapping genomic coordinates to transcript coordinates? (revived)
13 years, 2 months ago
Seattle, WA, United States
Mapping microarray probes to the genome using findOverlaps
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