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2 months ago
Barcelona/Universitat Pompeu Fabra
Research software engineer at UPF Barcelona
1 year, 9 months ago
Barcelona/Universitat Pompeu Fabra
Strand information in a GAlignmentsList object derived from strand-specific paired-end RNA-seq data
3 years, 9 months ago
Barcelona/Universitat Pompeu Fabra
Tenure-track Group Leader Position in Computational Biology
5 years, 11 months ago
Barcelona/Universitat Pompeu Fabra
working with genome-wide phastCons scores
5 years, 11 months ago
Barcelona/Universitat Pompeu Fabra
GO term as "keytype" in GO.db
5 years, 11 months ago
Barcelona/Universitat Pompeu Fabra
Efficient counting of nucleotide changes in short-reads
6 years ago
Barcelona/Universitat Pompeu Fabra
problems installing VariantFiltering package
6 years ago
Barcelona/Universitat Pompeu Fabra
TxDb annotations for human chrM
6 years ago
Barcelona/Universitat Pompeu Fabra
Fisher-Yates algorithm for DNA shuffling ?
6 years, 1 month ago
Barcelona/Universitat Pompeu Fabra
TxDb annotations for human chrM
6 years, 2 months ago
Barcelona/Universitat Pompeu Fabra
TxDb annotations for human chrM
7 years ago
Barcelona/Universitat Pompeu Fabra
How to set 'strandMode' with summarizeOverlaps()
7 years ago
Barcelona/Universitat Pompeu Fabra
How to build a RNA-seq table of counts for repeatmasker annotations
7 years, 2 months ago
Barcelona/Universitat Pompeu Fabra
Why edgeR::aveLogCPM() is simlar to log2(rowMeans(cpm)) instead of rowMeans(cpm(y, log=TRUE))
7 years, 10 months ago
Barcelona/Universitat Pompeu Fabra
[GSVA] Segfault with GSVA
8 years, 7 months ago
Barcelona/Universitat Pompeu Fabra
[GSVA] Segfault with GSVA
8 years, 11 months ago
Barcelona/Universitat Pompeu Fabra
Can "Glue Grant" arrays be processed with pd.hta.2.0?
9 years, 9 months ago
Barcelona/Universitat Pompeu Fabra
Gviz::IdeogramTrack() with chrM does not work
10 years, 3 months ago
Barcelona/Universitat Pompeu Fabra
bug in graph::removeEdge() on UGs with graphBAM objects
11 years ago
Barcelona/Universitat Pompeu Fabra
bug in graph::addNode() w/ graph::edgeData()
11 years, 1 month ago
Barcelona/Universitat Pompeu Fabra
working with genome-wide phastCons scores
11 years, 1 month ago
Barcelona/Universitat Pompeu Fabra
stranded intronic variants with VariantAnnotation::locateVariants()
11 years, 2 months ago
Barcelona/Universitat Pompeu Fabra
zero-row result breaks select() on PolyPhen.Hsapiens.* and SIFT.Hsapiens.*
11 years, 2 months ago
Barcelona/Universitat Pompeu Fabra
replace nucleotide at fixed position in a DNAStringSet object
11 years, 4 months ago
Barcelona/Universitat Pompeu Fabra
graph::edgeMatrix() fails for signature(object="graphBAM")
11 years, 5 months ago
Barcelona/Universitat Pompeu Fabra
RS-DBI driver error with org.Sc.sgd.db
11 years, 6 months ago
Barcelona/Universitat Pompeu Fabra
gmapR problem using a GmapGenome package with gsnap()
11 years, 6 months ago
Barcelona/Universitat Pompeu Fabra
GO term as "keytype" in GO.db
11 years, 9 months ago
Barcelona/Universitat Pompeu Fabra
bug in graph::edgeData()
11 years, 9 months ago
Barcelona/Universitat Pompeu Fabra
graph::subGraph() problem with node attributes
11 years, 11 months ago
Barcelona/Universitat Pompeu Fabra
correlation between two pathways' genes
12 years, 5 months ago
Barcelona/Universitat Pompeu Fabra
Rsubread crashes in 32bit linux
12 years, 8 months ago
Barcelona/Universitat Pompeu Fabra
how to rank affy probesets by their probe-effect magnitude
13 years ago
Barcelona/Universitat Pompeu Fabra
DESeq Error: pobs == ps[kAs[i] + 1] is not TRUE
14 years, 7 months ago
Barcelona/Universitat Pompeu Fabra
query and subject hits in findOverlaps through different space names
14 years, 9 months ago
Barcelona/Universitat Pompeu Fabra
stranded findOverlaps
14 years, 9 months ago
Barcelona/Universitat Pompeu Fabra
IRanges::rbind with names stopped working
14 years, 10 months ago
Barcelona/Universitat Pompeu Fabra
stranded findOverlaps
14 years, 10 months ago
Barcelona/Universitat Pompeu Fabra
GOHyperGResult in a data.frame, possible NAMESPACE problem?
14 years, 11 months ago
Barcelona/Universitat Pompeu Fabra
domainsignatures with non-human KEGG pathways
14 years, 11 months ago
Barcelona/Universitat Pompeu Fabra
control probes and missing annotations in Affy Mouse Gene 1.0 ST arrays
15 years, 9 months ago
Barcelona/Universitat Pompeu Fabra
interaction analysis
16 years, 1 month ago
Barcelona/Universitat Pompeu Fabra
GOstats and org.EcK12.eg.db
16 years, 8 months ago
Barcelona/Universitat Pompeu Fabra
two-line labels in GO graphs
16 years, 9 months ago
Barcelona/Universitat Pompeu Fabra
JOB: Microarray Bioinformatics Specialist
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