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5 years, 4 months ago
Barcelona/Universitat Pompeu Fabra
GO term as "keytype" in GO.db
5 years, 4 months ago
Barcelona/Universitat Pompeu Fabra
working with genome-wide phastCons scores
5 years, 4 months ago
Barcelona/Universitat Pompeu Fabra
Efficient counting of nucleotide changes in short-reads
5 years, 5 months ago
Barcelona/Universitat Pompeu Fabra
problems installing VariantFiltering package
5 years, 5 months ago
Barcelona/Universitat Pompeu Fabra
TxDb annotations for human chrM
5 years, 5 months ago
Barcelona/Universitat Pompeu Fabra
Fisher-Yates algorithm for DNA shuffling ?
5 years, 6 months ago
Barcelona/Universitat Pompeu Fabra
TxDb annotations for human chrM
5 years, 7 months ago
Barcelona/Universitat Pompeu Fabra
TxDb annotations for human chrM
6 years, 5 months ago
Barcelona/Universitat Pompeu Fabra
How to set 'strandMode' with summarizeOverlaps()
6 years, 6 months ago
Barcelona/Universitat Pompeu Fabra
How to build a RNA-seq table of counts for repeatmasker annotations
6 years, 7 months ago
Barcelona/Universitat Pompeu Fabra
Why edgeR::aveLogCPM() is simlar to log2(rowMeans(cpm)) instead of rowMeans(cpm(y, log=TRUE))
7 years, 3 months ago
Barcelona/Universitat Pompeu Fabra
[GSVA] Segfault with GSVA
8 years, 4 months ago
Barcelona/Universitat Pompeu Fabra
Can "Glue Grant" arrays be processed with pd.hta.2.0?
9 years, 2 months ago
Barcelona/Universitat Pompeu Fabra
Gviz::IdeogramTrack() with chrM does not work
9 years, 9 months ago
Barcelona/Universitat Pompeu Fabra
bug in graph::removeEdge() on UGs with graphBAM objects
10 years, 6 months ago
Barcelona/Universitat Pompeu Fabra
bug in graph::addNode() w/ graph::edgeData()
10 years, 6 months ago
Barcelona/Universitat Pompeu Fabra
working with genome-wide phastCons scores
10 years, 7 months ago
Barcelona/Universitat Pompeu Fabra
zero-row result breaks select() on PolyPhen.Hsapiens.* and SIFT.Hsapiens.*
10 years, 7 months ago
Barcelona/Universitat Pompeu Fabra
replace nucleotide at fixed position in a DNAStringSet object
10 years, 10 months ago
Barcelona/Universitat Pompeu Fabra
graph::edgeMatrix() fails for signature(object="graphBAM")
10 years, 11 months ago
Barcelona/Universitat Pompeu Fabra
RS-DBI driver error with org.Sc.sgd.db
10 years, 11 months ago
Barcelona/Universitat Pompeu Fabra
gmapR problem using a GmapGenome package with gsnap()
11 years, 2 months ago
Barcelona/Universitat Pompeu Fabra
bug in graph::edgeData()
11 years, 4 months ago
Barcelona/Universitat Pompeu Fabra
correlation between two pathways' genes
11 years, 11 months ago
Barcelona/Universitat Pompeu Fabra
Rsubread crashes in 32bit linux
12 years, 2 months ago
Barcelona/Universitat Pompeu Fabra
how to rank affy probesets by their probe-effect magnitude
14 years ago
Barcelona/Universitat Pompeu Fabra
query and subject hits in findOverlaps through different space names
14 years, 3 months ago
Barcelona/Universitat Pompeu Fabra
stranded findOverlaps
14 years, 3 months ago
Barcelona/Universitat Pompeu Fabra
IRanges::rbind with names stopped working
14 years, 3 months ago
Barcelona/Universitat Pompeu Fabra
stranded findOverlaps
14 years, 3 months ago
Barcelona/Universitat Pompeu Fabra
GOHyperGResult in a data.frame, possible NAMESPACE problem?
14 years, 4 months ago
Barcelona/Universitat Pompeu Fabra
domainsignatures with non-human KEGG pathways
14 years, 5 months ago
Barcelona/Universitat Pompeu Fabra
control probes and missing annotations in Affy Mouse Gene 1.0 ST arrays
15 years, 2 months ago
Barcelona/Universitat Pompeu Fabra
interaction analysis
16 years, 1 month ago
Barcelona/Universitat Pompeu Fabra
two-line labels in GO graphs
16 years, 2 months ago
Barcelona/Universitat Pompeu Fabra
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