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Created An Answer That Has Been Accepted
Awarded 5094 times (see all awards). Earned by the
following contributors:
1 year, 8 months ago
United States
Answer: RLE plots before and after RUVg correction are the same
1 year, 9 months ago
United States
Answer: TMM normalization after RUVg correction
1 year, 9 months ago
United States
Answer: Need Help w/ Subset on GRangesList
1 year, 9 months ago
United States
Answer: Question about correction of confounders for EWAS
1 year, 9 months ago
United States
Answer: Merging of Human and Mouse SingleCellExperiment Objects Error
1 year, 9 months ago
United States
Answer: How to interpret log2fold values when using numeric contrasts in DESEQ2?
1 year, 10 months ago
United States
Answer: Txdb object for UCSC hs1 (T2T-CHM13)
1 year, 10 months ago
United States
Answer: Reduce single cell experiment size to use as reference for annotation with Singl
1 year, 11 months ago
United States
Answer: What is the meaning of "CpG interrogation" and "single nucleotide extension(SBE)
1 year, 11 months ago
United States
Answer: limma::voom vs edgeR::voomLmFit - when to use?
1 year, 11 months ago
United States
Answer: STRINGdb R package reference class instantiation with v12.0
1 year, 11 months ago
United States
Answer: Predicting missing values splines DESeq2
2 years ago
United States
Answer: Annotation Dbi Error: unable to find an inherited method for function 'x' for si
2 years ago
United States
Answer: SeqSQC R library, functions PCA and IBD not working
2 years, 1 month ago
United States
Answer: DiffBind returns different grey lists every time I run dba.blacklist even if I s
2 years, 1 month ago
United States
Answer: Remove duplicates of colData in TreeSummarizedExperiment
2 years, 3 months ago
United States
Answer: Questions Trying to Re-create MicroArray Data (GSE97562) (Fig. 2)
2 years, 3 months ago
United States
Answer: Running DEseq2 without "factor" gives unexpected results
2 years, 4 months ago
United States
Answer: Using oligo or xps to read and convert RNA-seq data CEL file to txt file.
2 years, 5 months ago
United States
Answer: P-value histogram of testLinearModel is not uniform
2 years, 6 months ago
United States
Answer: Using gcrma() and using the t-test to compare single genes of interest for disea
2 years, 7 months ago
United States
Answer: How to annotate genes from results of DiffBind
2 years, 8 months ago
United States
Answer: GOstats - subsetting termGraphs with terms from the html report and missing node
2 years, 8 months ago
United States
Answer: how to extract and match information of two filein R
2 years, 9 months ago
United States
Answer: TPP2D - multicore computing for bootstrapNullAlternativeModel(...)
2 years, 9 months ago
United States
Answer: Flank GenomicRanges on Both Sides
2 years, 9 months ago
United States
Answer: Is it possible to annotate a GRanges Object that has scaffolding names and not c
2 years, 9 months ago
United States
Answer: Successor of genesBy Defunct Function
2 years, 11 months ago
United States
Answer: how can I add a label for granges using the geom_rect ?
2 years, 11 months ago
United States
Answer: Too many differentially expressed miRNA with limma
2 years, 11 months ago
United States
Answer: Simple queryAE command returning "Error: 1: Document is empty"
2 years, 12 months ago
United States
Answer: error loading kallisto output in tximport
3 years ago
United States
Answer: Error in dimnamesGets(x, value) when trying to read data using Seurat package
3 years, 1 month ago
United States
Answer: getSeq failing with DNAStringSet and GRanges
3 years, 1 month ago
United States
Answer: karyoploteR genome coverage plotting using BSgenome.TAIR10
3 years, 1 month ago
United States
Answer: Error message from protein coding prediction with VariantAnnotation
3 years, 2 months ago
United States
Answer: biomaRt finding transcript lenghts
3 years, 2 months ago
United States
Answer: [BigWigFile] import as RLE vs default and length comparaison
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