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Created An Answer That Has Been Accepted
Awarded 4960 times (see all awards). Earned by the
following contributors:
2 years, 8 months ago
United States
Answer: How to obtain a GC content file to use in HMMcopy?
2 years, 9 months ago
United States
Answer: Biomart's getBM returns no genes for an existing GO-term in grch38, and less the
2 years, 9 months ago
United States
Answer: Accession ID Conversion and Missing Results
2 years, 10 months ago
United States
Answer: DESeq2, geometric means using posCounts
2 years, 10 months ago
United States
Answer: importing RSEM isoform to Gene Name with tximport
2 years, 10 months ago
United States
Answer: R NanoStringDiff: DE analysis, from 2 group comparison method how "logFC" genera
2 years, 11 months ago
United States
Answer: edgeR calcNormFactors or normalize with voom?
2 years, 11 months ago
United States
Answer: How does the empirical Bayes moderation (eBayes) in the limma pipeline work?
2 years, 11 months ago
United States
Answer: Convert DataFrame to data.frame While Keeping Column Name Syntax
2 years, 11 months ago
United States
Answer: How to run getSeq() on a GRanges object with invalid DNA letters?
2 years, 12 months ago
United States
Answer: Hypergeometric (gene set enrichment) test using "Categories" package
3 years ago
United States
Answer: LOC gene IDs for characterised genes in annotation files
3 years ago
United States
Answer: How to overcome issue linked to loading big R object
3 years ago
United States
Answer: Can I use BSgenome for in-house assemblies?
3 years, 1 month ago
United States
Answer: Error: package or namespace load failed for ‘org.Mm.eg.db':
3 years, 1 month ago
United States
Answer: Error in (function (classes, fdef, mtable) : unable to find an inherited met
3 years, 1 month ago
United States
Answer: Error when using org.Hs.eg.db package
3 years, 2 months ago
United States
Answer: how to make a contrast of uniquely DE genes
3 years, 2 months ago
United States
Answer: duplicate exonrank information in library("Homo.sapiens")
3 years, 2 months ago
United States
Answer: Problem with pd.hta.2.0 package installation
3 years, 2 months ago
United States
Answer: makeTxDbFromUCSC("mm10", "refGene") gives "not supported" error
3 years, 2 months ago
United States
Answer: Unable to read in the IDAT files using read.metharray.exp()
3 years, 3 months ago
United States
Answer: Convert UniProt Entry Names into Gene Symbols
3 years, 4 months ago
United States
Answer: Issue with TxDb.Mmusculus.UCSC.mm10.knownGene "TXNAME" no longer UCSC style but
3 years, 4 months ago
United States
Answer: Complexheatmap Installation Issue
3 years, 4 months ago
United States
Answer: Duplicated ENTREZID gene annotations org.Hs.eg.db
3 years, 5 months ago
United States
Answer: Annotation with org.Hs.eg.db Genome Build 38
3 years, 5 months ago
United States
Answer: Convert Refseq Protein IDs to UniProt IDs
3 years, 5 months ago
United States
Answer: Troubles implementing LIMMA for paired samples (before/after treatment) comparai
3 years, 5 months ago
United States
Answer: Annotation: Use of org.Hs.egCHR to map Gene Entrez to Chromosome
3 years, 5 months ago
United States
Answer: to extract the mRNA sequences of the canonical RefSeq genes
3 years, 5 months ago
United States
Answer: GenomicRanges equivalent to bedtools cluster
3 years, 6 months ago
United States
Answer: How to mimic biomaRt results with AnnotationHub?
3 years, 6 months ago
United States
Answer: importing BED with non-integer values
3 years, 6 months ago
United States
Answer: EdgeR analysis with no replicates - how to run exact test with set dispersion va
3 years, 6 months ago
United States
Answer: OrganismDbi throws error for Oryza Sativa indica org.db preparation
3 years, 6 months ago
United States
Answer: The best pacakge to annotate a set of regions
3 years, 7 months ago
United States
A: How to resolve NAs when annotating a diff gene list with org.Hs.eg.db terms?
3 years, 7 months ago
United States
A: How can I combine results tables into a single output?
3 years, 7 months ago
United States
A: How do you create a targets dataframe in edgeR?
3 years, 8 months ago
United States
A: Replicating GO website analysis with bioconductor packages (topGO?)
3 years, 8 months ago
United States
A: How to generate custom annotation for rat genome rn6 in ChIPQC
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