Scholar
Created An Answer That Has Been Accepted
Awarded 5099 times (see all awards). Earned by the
following contributors:
7 years, 3 months ago
WEHI, Melbourne, Australia
A: Perfectly aligning sequences not mapping to worm genome with Subread-align?
7 years, 3 months ago
WEHI, Melbourne, Australia
A: Reading and normalizing two-color Agilent microarrays
7 years, 3 months ago
WEHI, Melbourne, Australia
A: Building linear model (age effect on gene expression)
7 years, 3 months ago
WEHI, Melbourne, Australia
A: Is number of rotations dependent on number of gene sets in mroast?
7 years, 3 months ago
WEHI, Melbourne, Australia
Building linear model (age effect on gene expression)
7 years, 3 months ago
WEHI, Melbourne, Australia
Why different filtering criteria using CPM to filter the RNA-seq count data in edgeR have so much influence on the number of DE genes?
7 years, 3 months ago
WEHI, Melbourne, Australia
ANOVA-like test via treat() in limma
7 years, 3 months ago
WEHI, Melbourne, Australia
another contrast question - edgeR + scRNA-seq + timecourse
7 years, 3 months ago
WEHI, Melbourne, Australia
A: Why do I have this perfect volcano plot from Limma?
7 years, 3 months ago
WEHI, Melbourne, Australia
A: limma roast syntax and interpretation
7 years, 3 months ago
WEHI, Melbourne, Australia
A: ANOVA-like test via treat() in limma
7 years, 4 months ago
WEHI, Melbourne, Australia
A: makeContrasts for comparing multiple levels of a factor variable to the referenc
7 years, 4 months ago
WEHI, Melbourne, Australia
A: Have I used Deseq2 ,on protein array data, correctly? Or should I be using anoth
7 years, 5 months ago
WEHI, Melbourne, Australia
A: Differential analysis between 2 groups (n=1) vs (n=3) moderated t-test
7 years, 5 months ago
WEHI, Melbourne, Australia
A: [limma] Define contrasts for model with covariates
7 years, 6 months ago
WEHI, Melbourne, Australia
another contrast question - edgeR + scRNA-seq + timecourse
7 years, 6 months ago
WEHI, Melbourne, Australia
Limma - how to manage huge differences in library sizes
7 years, 6 months ago
WEHI, Melbourne, Australia
Performing differential gene analysis on RT PCR experimental data
7 years, 6 months ago
WEHI, Melbourne, Australia
Finding genes respond differently to treatment between many genotype comparison
7 years, 6 months ago
WEHI, Melbourne, Australia
Why different filtering criteria using CPM to filter the RNA-seq count data in edgeR have so much influence on the number of DE genes?
7 years, 6 months ago
WEHI, Melbourne, Australia
ANOVA-like test via treat() in limma
7 years, 6 months ago
WEHI, Melbourne, Australia
A: another contrast question - edgeR + scRNA-seq + timecourse
7 years, 6 months ago
WEHI, Melbourne, Australia
Why different filtering criteria using CPM to filter the RNA-seq count data in edgeR have so much influence on the number of DE genes?
7 years, 6 months ago
WEHI, Melbourne, Australia
another contrast question - edgeR + scRNA-seq + timecourse
7 years, 6 months ago
WEHI, Melbourne, Australia
A: Limma - how to manage huge differences in library sizes
7 years, 6 months ago
WEHI, Melbourne, Australia
A: how to calculate the logFC value
7 years, 6 months ago
WEHI, Melbourne, Australia
Answer: Question on performing/interpretation results ANOVA-like analysis using limma
7 years, 7 months ago
WEHI, Melbourne, Australia
A: Finding genes respond differently to treatment between many genotype comparison
7 years, 7 months ago
WEHI, Melbourne, Australia
A: Where is it possible to find gene sets in rdata format for GSEA ?
7 years, 7 months ago
WEHI, Melbourne, Australia
A: Error in ebayes in limma when analyzing GTEx data
7 years, 9 months ago
WEHI, Melbourne, Australia
A: How to create a customized OrgDb in order to perform kegga analysis?
7 years, 9 months ago
WEHI, Melbourne, Australia
A: Reading in delta Ct values using HTqPCR
7 years, 10 months ago
WEHI, Melbourne, Australia
A: Moderated F-statistics for time course experiment
7 years, 10 months ago
WEHI, Melbourne, Australia
A: edgeR design matrix and contrasts que: how to make contrast between groups that
7 years, 10 months ago
WEHI, Melbourne, Australia
A: micro array analysis using RMA method Using affy, limma
7 years, 10 months ago
WEHI, Melbourne, Australia
A: edgeR::cpm - Doesn't work on DGEList after update
7 years, 11 months ago
WEHI, Melbourne, Australia
A: Representvie gene expression value in one condition with several replicates
7 years, 12 months ago
WEHI, Melbourne, Australia
A: How to save different coefficients as different outputs using topTable in limma
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