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Created An Answer That Has Been Accepted
Awarded 5049 times (see all awards). Earned by the
following contributors:
1 week, 2 days ago
United States
Answer: Struggle with the replicates of epic array data
2 weeks, 1 day ago
United States
Answer: preprocessIllumina error with EPICv2 array
1 month ago
United States
Answer: biomaRt rnorvegicus_gene_ensembl not available anymore
1 month, 1 week ago
United States
Answer: clusterProfiler enrichGO on only T-cell related GO terms
1 month, 3 weeks ago
United States
Answer: How to reverse complement some elements of a DNAStringSet
1 month, 3 weeks ago
United States
Answer: Are transformed values from rlog /vst log2 normalized counts?
1 month, 3 weeks ago
United States
Answer: How to conduct maSigPro analysis with only one condition?
2 months, 1 week ago
United States
Answer: ISO a solution to rank-order introns by transcript
2 months, 1 week ago
United States
Answer: Issues with retrieving Zea mays genes dataset: biomaRt error: looks like we're c
2 months, 1 week ago
United States
Answer: Batch adjustment for cohort based RNA seq data
3 months ago
United States
Answer: Should tSNE from biol. replicates look alike?
3 months, 2 weeks ago
United States
Answer: What is the importance of `--countReadPairs` in featureCounts on paired end data
3 months, 3 weeks ago
United States
Answer: the count matrix have decimal values
3 months, 4 weeks ago
United States
Answer: How to Query Only SNPs from the biomaRt Variation Database
4 months ago
United States
Answer: DESeq2: How to Compare the Condition Effects of Two Different Treatments?
4 months, 2 weeks ago
United States
Answer: Limma comparing gene expression between base line and one treatment
4 months, 2 weeks ago
United States
Answer: Limma - 0 downreg and upreg values
4 months, 3 weeks ago
United States
Answer: findOverlaps(), queryHits and subjectHits()
5 months, 2 weeks ago
United States
Answer: Test of Multiple Linear Combination on coefficients from Wald Test in Deseq2
5 months, 3 weeks ago
United States
Answer: DESeq2 returns results for group with just one replicate
6 months, 1 week ago
United States
Answer: LRT, pairwise comparisons and p-value adjustment
7 months, 1 week ago
United States
Answer: Help with error using camera() in limma
7 months, 1 week ago
United States
Answer: Math expression in shapeCustom legend in EnhancedVolcano
7 months, 1 week ago
United States
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
7 months, 2 weeks ago
United States
Answer: How to retrieve gene ontology GO class from gene list?
7 months, 4 weeks ago
United States
Answer: Not fully paired differential gene expression analysis
8 months, 3 weeks ago
United States
Answer: Problem converting msigdb Human symbols to Zebrafish in gmt format
8 months, 3 weeks ago
United States
Answer: padj-based gradient scale from barplot (clusterProfiler results) does not work p
9 months, 1 week ago
United States
Answer: Estimating Cell Counts for EPIC V2 array data
9 months, 1 week ago
United States
Answer: clusterProfiler, AnnotationHub, and discrepancies in GO Terms
9 months, 2 weeks ago
United States
Answer: RLE plots before and after RUVg correction are the same
10 months, 1 week ago
United States
Answer: Question about correction of confounders for EWAS
10 months, 2 weeks ago
United States
Answer: Merging of Human and Mouse SingleCellExperiment Objects Error
10 months, 3 weeks ago
United States
Answer: How to interpret log2fold values when using numeric contrasts in DESEQ2?
11 months, 3 weeks ago
United States
Answer: Txdb object for UCSC hs1 (T2T-CHM13)
11 months, 3 weeks ago
United States
Answer: Reduce single cell experiment size to use as reference for annotation with Singl
11 months, 4 weeks ago
United States
Answer: What is the meaning of "CpG interrogation" and "single nucleotide extension(SBE)
1 year ago
United States
Answer: limma::voom vs edgeR::voomLmFit - when to use?
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