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12 months ago by
sup23010
sup23010 wrote:

Hi,

I don't understand what the problem is because I have used it to download data from TCGA with no problem just a few weeks ago. The warning I am getting is this:

Error: package or namespace load failed for ‘TCGAbiolinks’ in loadNamespace(j <- imp[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called ‘GenomicAlignments’
package ‘TCGAbiolinks’ was built under R version 3.4.1

Can anybody help me figuring out what the problem is?

modified 12 months ago by James W. MacDonald47k • written 12 months ago by sup23010
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12 months ago by
United States
James W. MacDonald47k wrote:

Yes.

 there is no package called ‘GenomicAlignments’

means that there is no package called GenomicAlignments installed in your version of R, so you need to install GenomicAlignments.