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Question: Error downloading the package
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gravatar for sup230
9 weeks ago by
sup23010
sup23010 wrote:

Hi, 

I am trying to download TCGA biolinks and for some reason I keep getting error message

I don't understand what the problem is because I have used it to download data from TCGA with no problem just a few weeks ago. The warning I am getting is this:

Error: package or namespace load failed for ‘TCGAbiolinks’ in loadNamespace(j <- imp[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
 there is no package called ‘GenomicAlignments’
In addition: Warning message:
package ‘TCGAbiolinks’ was built under R version 3.4.1 

 

Can anybody help me figuring out what the problem is? 

Thanks for your input!

 

ADD COMMENTlink modified 9 weeks ago by James W. MacDonald45k • written 9 weeks ago by sup23010
0
gravatar for James W. MacDonald
9 weeks ago by
United States
James W. MacDonald45k wrote:

Yes.

 there is no package called ‘GenomicAlignments’

means that there is no package called GenomicAlignments installed in your version of R, so you need to install GenomicAlignments.

ADD COMMENTlink written 9 weeks ago by James W. MacDonald45k
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