Calulation of ka/ks (dn/ds) using sliding windows
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@emiliomastriani-11983
Last seen 4.3 years ago

Hello guys, I wish to do the same calculation like https://www.mathworks.com/examples/bioinfo/mw/bioinfo_product-dndsdemo-analyzing-synonymous-and-nonsynonymous-substitution-rates (calulation of ka/ks (dn/ds) through sliding windows) using Bioconductor. Is there some package that can support my research?

Thanks

evolutionary analysis • 568 views
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Hi Emilio,

It is always more helpful to provide a reproducible example snippet of the code and data you currently
have and a text representation of the result that you want to achieve. This way those who view your
question are more likely to provide a response. 


I would also discourage the use of links as it provides additional and sometimes inconvenient
material for the person who would like to help. Please provide a summary of the operation rather
than the documentation. 

Best regards,

Marcel

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