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Question: Adding gene names which are differentially expressed in the plot
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gravatar for fawazfebin
13 months ago by
fawazfebin30
fawazfebin30 wrote:

Hi

Can anyone please guide me on plotting a graph showing the gene names of top differentially expressed genes in edgeR ?

 

 

ADD COMMENTlink written 13 months ago by fawazfebin30

Please specify the type of plot that you want to make as there are many different options to visualise these kind of results

ADD REPLYlink written 13 months ago by thokall120
I would like to get a scatterplot with gene names.Thanks in advance
ADD REPLYlink written 13 months ago by fawazfebin30

So a scatterplot with what values?

Two common types are volcano plots and MA plots. You would likely get faster and more useful answers if you add the code snippets you tried so far and perhaps a link to an example of a figure that you would like to create.

ADD REPLYlink written 13 months ago by thokall120
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