how to define the downstream range in ChIPseeker
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@lifengliubiology-13766
Last seen 6.7 years ago

Does anyone know how to set the downstream range for the peak annotation? It seems the default setting of downstream is 3kb. I would like to set the downstream range from 3kb to 500bp. Thanks
ChIPseeker H3K27me3 chipseq chipseeker • 2.6k views
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Guangchuang Yu ★ 1.2k
@guangchuang-yu-5419
Last seen 22 days ago
China/Guangzhou/Southern Medical Univer…

Sorry, it is hard coded.

I update the source code in devel branch to support setting the downstream range via:

options(ChIPseeker.downstreamDistance = 500)
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