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                    mcarmel
        
    
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        @mcarmel-14827
        Last seen 7.8 years ago
        
    Hi
After using the Illumina Infinium MethylationEPIC BeadChip, differentially methylated blocks (DMB) were calculated by ChAMP R pipeline by the method named block finder.
In the results I have a column with indexStart and indexEnd.
I wonder if there is an index of probes from the Illumina Infinium MethylationEPIC BeadChip, in order to determine the exact genomic loci of the block?
Thanks
Miri

Can you clarify? You have stated that the output includes the start and end of the block, so it's not clear what you want if not that.