Hello Everyone/Rory,
I'm working on ChIP and ATAC data sets analyses, however, I need help at this point. My goal is to use pre-normalised data (e.g. using MAnorm) as DiffBind input so that later I can create contrast list (dba.contrast), reports (dba.report) and plot (dba.plotXYZ).
Question: Is there a way by which I could use the output (MAnorm_result_commonPeak_merged.xls) obtained after MAnorm normalization as an input for DiffBind?
Any help or recommendation is appreciated.
Thanks,
Ajeet
FYI: I'm aware of these posts e.g.