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Question: how to analyze "Beta-score" and get CNVdata using Comunee
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5 months ago by
bird.of.clockwise0 wrote:

Hi all,

I got methylation Beta and p-value sheet file from GEO in .txt style.

In the Conumee vignettes, there is a description that "If raw IDAT files are unavailable, data can also be supplied by importing text-based input files, e.g. as generated by GenomeStudio or downloaded from the GEO repository. More details are given later."

This is what I really want to do!
Could anybody show me how to analyze Copy number variant using text-baset input files generated GenomeStudio(Illumina infinium 450K)?

Thanks in advance.
 

Atsushi

ADD COMMENTlink modified 5 months ago • written 5 months ago by bird.of.clockwise0
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