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Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance
by
samer
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0
This is the result i got when i only looked on day 04 for the gene in example 1 posted above
dds_sub <- dds[, dds$date %in% c("day04"…
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There are two types of probes used by Illumina. The type I probes bind directly to the CpG site and have two different probes (one for a me…
Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance
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Michael Love
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Then for the remaining genes that you don't think are DE, just plot like this:
```
dds_sub <- dds[,dds$condition %in% c("x","y")]
dropleve…
Comment: Small RNA-seq Analysis DESEQ2 : Unexpected Significance
by
samer
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yes i turned it off @mikelove
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It looks like `autonomics` uses `BiocFileCache` to create a local copy of the data and save repeat downloading. Given the (relatively) rec…
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