Error with estimateCellCounts() with Illumina 450K data
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@alexshirokaya-15315
Last seen 6.1 years ago

Hi! I am trying to run estimateCellCounts() on my 450K data, this is where I get error:

cellCounts <- estimateCellCounts(RGset)

Error looks like this:

Error in colData(referenceRGset) :
  no slot of name "colData" for this object of class "RGChannelSet"

I have minfi 1.25.1 and FlowSorted.Blood.450k 1.8.0

 

What could be wrong?

minfi • 640 views
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