Hi
I am newbie in monocle. When I am running estimateSizeFactors(ohla), all values are ohla$Size_Factor
[1] Inf Inf Inf Inf Inf Inf
why?
ohla
CellDataSet (storageMode: environment)
assayData: 21011 features, 2394 samples
element names: exprs
protocolData: none
phenoData
sampleNames: GW08_PFC1_sc1 GW08_PFC1_sc2 ... GW23_PFC2_SF2_F25_sc50 (2394 total)
varLabels: SampleName Weeks ... Size_Factor (5 total)
varMetadata: labelDescription
featureData
featureNames: A1BG A1BG-AS1 ... ZZZ3 (21011 total)
fvarLabels: gene_short_name
fvarMetadata: labelDescription
experimentData: use 'experimentData(object)'
Annotation: