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Question: help for deseq2
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gravatar for ndiayediop2
3 months ago by
ndiayediop20 wrote:

hi 

i would like a help please

dds=DESeqDataSetFromMatrix(count = count,colData = colData,design = ~condition)

Error in DESeqDataSet(se, design = design, ignoreRank) : 
  some values in assay are negative

ADD COMMENTlink modified 8 weeks ago • written 3 months ago by ndiayediop20
1
gravatar for James W. MacDonald
3 months ago by
United States
James W. MacDonald47k wrote:

The error says that your count data has only 1 column, but the colData has 16. You need to have as many columns in your count data as you have rows in your colData.

ADD COMMENTlink written 3 months ago by James W. MacDonald47k

mais si je fais un View (count) je vois mes colonnes

ADD REPLYlink written 8 weeks ago by ndiayediop20
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