Question: help for deseq2
gravatar for ndiayediop2
5 months ago by
ndiayediop20 wrote:


i would like a help please

dds=DESeqDataSetFromMatrix(count = count,colData = colData,design = ~condition)

Error in DESeqDataSet(se, design = design, ignoreRank) : 
  some values in assay are negative

ADD COMMENTlink modified 4 months ago • written 5 months ago by ndiayediop20
gravatar for James W. MacDonald
5 months ago by
United States
James W. MacDonald48k wrote:

The error says that your count data has only 1 column, but the colData has 16. You need to have as many columns in your count data as you have rows in your colData.

ADD COMMENTlink written 5 months ago by James W. MacDonald48k

mais si je fais un View (count) je vois mes colonnes

ADD REPLYlink written 4 months ago by ndiayediop20
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