Bioconductor Mirna-seq

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deseq2 rnaseq mirna-seq differential gene expression

written 8.0 years ago by klalit1803 ▴ 20

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mirna-seq limma

updated 7.5 years ago by Gordon Smyth 53k • written 7.5 years ago by Michael Stone • 0

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mirna-seq

updated 7.7 years ago by Levi Waldron ★ 1.1k • written 7.7 years ago by ndiayediop2 • 0

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mirna-seq

7.8 years ago • updated 7.7 years ago ndiayediop2 • 0

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r survival analysis rtcga tcgabiolinks mirna-seq

7.7 years ago atakanekiz ▴ 30

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deseq2 differentially expression mirna-seq mirna target prediction

updated 7.8 years ago by Michael Love 43k • written 7.8 years ago by Björn • 0

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DESeq2 mirna-seq small RNA-seq

updated 8.1 years ago by Michael Love 43k • written 8.1 years ago by CandiceChuDVM ▴ 40

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deseq2 mirna-seq experimental design differential expression

updated 8.8 years ago by Gavin Kelly ▴ 690 • written 8.8 years ago by francesco.gandolfi ▴ 10

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miRNA mirna-seq

updated 9.0 years ago by Jon Bråte ▴ 270 • written 9.0 years ago by just • 0

9 results • Page 1 of 1

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Comment: Unable to find ENTREZ IDs by Adithi • 0

Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…

Comment: Unable to find ENTREZ IDs by Adithi • 0

Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…

Answer: Unable to find ENTREZ IDs by James W. MacDonald 68k

Those are the 'symbols', and are a concatenation of LOC and the NCBI Gene ID (what used to be called an Entrez Gene ID). As an example:http…

Answer: Inconsistencies between accessor functions for TxDb databases with selected seql by a2a2hd42aa • 0

Technical inconsistencies in database accessors can disrupt your workflow, but finding a reliable source to download online mobile games sh…

Comment: Can sample-level weights be used when analysing GSVA scores in limma? by A.Barden ▴ 20

Thanks both for this useful information.

Votes

Answer: OrgDb for maize

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Do I map probes to gene symbols BEFORE or AFTER differentially expressed gene analysis?

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