Hi all,

I was trying to install clusterProfiler in my R Studio but I was unable to do it. As I am using my institute's server, I have only local access. The command I used to install is: 

biocLite("clusterProfiler", lib = "~/R/3.4/clusterProfiler")

The error I got is:

*** installing help indices
  converting help for package ‘DOSE’
    finding HTML links ... done
    DOSE-package                            html  
    DataSet                                 html  
    EXTID2NAME                              html  
    GSEA_internal                           html  
    barplot.enrichResult                    html  
    clusterSim                              html  
    cnetplot-methods                        html  
    cnetplot_internal                       html  
    computeIC                               html  
    doSim                                   html  
    dotplot-methods                         html  
    enrichDGN                               html  
    enrichDGNv                              html  
    enrichDO                                html  
    enrichMap                               html  
    enrichNCG                               html  
    enrichResult-class                      html  
    enricher_internal                       html  
    fortify.enrichResult                    html  
    gene2DO                                 html  
    geneID                                  html  
    geneInCategory                          html  
    geneSim                                 html  
    gsInfo                                  html  
    gseDGN                                  html  
    gseDO                                   html  
    gseNCG                                  html  
    gseaResult-class                        html  
    gseaplot                                html  
    gsfilter                                html  
    list2graph                              html  
    mclusterSim                             html  
    netplot                                 html  
    plot-methods                            html  
    rebuildAnnoData                         html  
    reexports                               html  
    ridgeplot                               html  
    scaleNodeColor                          html  
    setReadable                             html  
    setting.graph.attributes                html  
    show-methods                            html  
    simplot                                 html  
    summary-methods                         html  
    theme_dose                              html  
    upsetplot-methods                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
sh: line 1: 61860 Segmentation fault      (core dumped) '/usr/lib64/R/bin/R' --no-save --slave 2>&1 < '/tmp/Rtmp1c8RKq/filef19c7a7d05e9'

 *** caught segfault ***
address (nil), cause 'memory not mapped'
An irrecoverable exception occurred. R is aborting now ...
ERROR: loading failed
* removing ‘/home/sato_y/R/3.4/DOSE’

 *** caught segfault ***
address (nil), cause 'memory not mapped'

Traceback:
 1: q("no", status = status, runLast = FALSE)
 2: do_exit(status = status)
 3: do_exit_on_error()
 4: errmsg("loading failed")
 5: do_install_source(pkg_name, instdir, pkg, desc)
 6: do_install(pkg)
 7: tools:::.install_packages()
An irrecoverable exception occurred. R is aborting now ...
/usr/lib64/R/bin/INSTALL: line 34: 61851 Done                    echo 'tools:::.install_packages()'
     61852 Segmentation fault      (core dumped) | R_DEFAULT_PACKAGES= LC_COLLATE=C "${R_HOME}/bin/R" $myArgs --slave --args ${args}
ERROR: dependency ‘DOSE’ is not available for package ‘clusterProfiler’
* removing ‘/home/sato_y/R/3.4/clusterProfiler’

The downloaded source packages are in
	‘/tmp/RtmpeVVmdz/downloaded_packages’
installation path not writeable, unable to update packages: ade4, amap, ape,
  bit, cluster, data.table, edgeR, fastcluster, glmnet, highr, htmlTable,
  httpuv, kernlab, later, lmtest, Matrix, mgcv, munsell, mvtnorm, nlme,
  pillar, pkgmaker, progress, purrr, quantreg, RcppArmadillo, rjson, rlang,
  rmarkdown, robustbase, rrcov, slam, sp, spam, statnet.common, stringi, tm,
  xgboost, xts, zoo
Warning messages:
1: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘DOSE’ had non-zero exit status
2: In install.packages(pkgs = doing, lib = lib, ...) :
  installation of package ‘clusterProfiler’ had non-zero exit status

This is the details of my session info:

R version 3.4.3 (2017-11-30)
Platform: x86_64-redhat-linux-gnu (64-bit)
Running under: CentOS Linux 7 (Core)

Matrix products: default
BLAS/LAPACK: /usr/lib64/R/lib/libRblas.so

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] BiocInstaller_1.28.0

loaded via a namespace (and not attached):
[1] compiler_3.4.3 tools_3.4.3    yaml_2.1.19  

Please advice on how I can solve this issue. Thank you very much.