Question: pintersect using GRangeslist
gravatar for rmortenson7
10 weeks ago by
rmortenson70 wrote:

I'm attempting to run pintersect on a GRangesList and am receiving the following error when I do so:

 *unable to find an inherited method for function ‘pintersect’ for signature ‘"CompressedIRangesList", "CompressedIRangesList"’*

pintersect(ranges(gr[-length(gr)]), ranges(gr[-1]+pad), resolve.empty = 'max.start'), where gr is a GRangesList.  Has anyone else experienced this issue? Has there been an update to pintersect or GRangesList that is causing this bug?  Thanks in advance                                                                                       

ADD COMMENTlink written 10 weeks ago by rmortenson70

Please submit your sessionInfo() and also check BiocManager::biocValid(). Paste outputs of both.

ADD REPLYlink modified 10 weeks ago • written 10 weeks ago by nitesh.turaga130
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