Question: pintersect using GRangeslist
0
gravatar for rmortenson7
14 months ago by
rmortenson70 wrote:

I'm attempting to run pintersect on a GRangesList and am receiving the following error when I do so:

 *unable to find an inherited method for function ‘pintersect’ for signature ‘"CompressedIRangesList", "CompressedIRangesList"’*

pintersect(ranges(gr[-length(gr)]), ranges(gr[-1]+pad), resolve.empty = 'max.start'), where gr is a GRangesList.  Has anyone else experienced this issue? Has there been an update to pintersect or GRangesList that is causing this bug?  Thanks in advance                                                                                       

grangeslist • 240 views
ADD COMMENTlink written 14 months ago by rmortenson70

Please submit your sessionInfo() and also check BiocManager::biocValid(). Paste outputs of both.

ADD REPLYlink modified 14 months ago • written 14 months ago by nitesh.turaga140
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