Question: pintersect using GRangeslist
gravatar for rmortenson7
14 months ago by
rmortenson70 wrote:

I'm attempting to run pintersect on a GRangesList and am receiving the following error when I do so:

 *unable to find an inherited method for function ‘pintersect’ for signature ‘"CompressedIRangesList", "CompressedIRangesList"’*

pintersect(ranges(gr[-length(gr)]), ranges(gr[-1]+pad), resolve.empty = 'max.start'), where gr is a GRangesList.  Has anyone else experienced this issue? Has there been an update to pintersect or GRangesList that is causing this bug?  Thanks in advance                                                                                       

grangeslist • 240 views
ADD COMMENTlink written 14 months ago by rmortenson70

Please submit your sessionInfo() and also check BiocManager::biocValid(). Paste outputs of both.

ADD REPLYlink modified 14 months ago • written 14 months ago by nitesh.turaga140
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 113 users visited in the last hour