Question: PureCN PureCN.R --rds option recreate all output files?
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gravatar for twtoal
13 months ago by
twtoal0
twtoal0 wrote:

If I've run PureCN once and generated output files including .rds file, if I run it again and specify the --rds argument and give it the name of the .rds file it created in the first run, (and otherwise give it all the same arguments as in the first run), will it re-create all of the output files it created the first time?

purecn --rds • 164 views
ADD COMMENTlink modified 13 months ago by markus.riester110 • written 13 months ago by twtoal0
Answer: PureCN PureCN.R --rds option recreate all output files?
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gravatar for markus.riester
13 months ago by
markus.riester110 wrote:

Yes, if you run it with --rds, it will open the CSV file, pick the solution closest to the there specified purity/ploidy combination and re-create all PureCN.R output files (instead of the default of creating the output for the maximum likelihood solution).

ADD COMMENTlink written 13 months ago by markus.riester110
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