FYI, I had to remove all occrrances of the string "-snapshot" in the getBioC.R script to make it work. Once I did that and used getBioC(libName="all"), then things seemed more successful but with some warnings: > getBioC(libName="all") updating HTML package descriptions updating HTML package descriptions updating HTML package descriptions updating HTML package descriptions updating HTML package descriptions updating HTML package descriptions updating HTML package descriptions updating HTML package descriptions updating HTML package descriptions updating HTML package descriptions updating HTML package descriptions updating HTML package descriptions [1] "Successful" Warning messages: 1: DESCRIPTION file of package annotate missing or broken in: package.description(i, field = "Title") 2: DESCRIPTION file of package genefilter missing or broken in: package.description(i, field = "Title") 3: DESCRIPTION file of package genefilter missing or broken in: package.description(i, field = "Title") Cheers, Dick ********************************************************************** ********* Richard P. Beyer, Ph.D. University of Washington Tel.:(206) 616 7378 Environmental Health, Box 354695 Fax: (206) 685 4696 4225 Roosevelt Way NE, # 100 Seattle, WA 98105-6099 ********************************************************************** *********

>>>>> "dick" == Dick Beyer <dbeyer@u.washington.edu> writes: dick> FYI, dick> I had to remove all occrrances of the string "-snapshot" in the getBioC.R script to make it work. Actually, you should have only needed to do that once (for the stable versions). We'll have to follow up a bit more on that... best, -tony -- A.J. Rossini Rsrch. Asst. Prof. of Biostatistics U. of Washington Biostatistics rossini@u.washington.edu FHCRC/SCHARP/HIV Vaccine Trials Net rossini@scharp.org -------------- http://software.biostat.washington.edu/ ---------------- FHCRC: M-W: 206-667-7025 (fax=4812)|Voicemail is pretty sketchy/use Email UW: Th: 206-543-1044 (fax=3286)|Change last 4 digits of phone to FAX (my friday location is usually completely unpredictable.)