GWAS power and sample size calculation
1
0
Entering edit mode
@tarekmohamed-9489
Last seen 5.9 years ago

Hi All,

GWAS power and sample size calculation depend on several factor including the inheritance model (dominant, recessive or additive), the frequency of the high risk alleles in the population, the overall disease risk in the population, odds ratio (or relative risk), and the significance level.

What is the best package that I can use to estimate my sample size based on hypothetical information of the above mentioned terms?

Thanks Tarek

GWAS power GWAS sample size • 1.9k views
ADD COMMENT
0
Entering edit mode
Kevin Blighe ★ 4.0k
@kevin
Last seen 6 weeks ago
Republic of Ireland

Here are my answers, on Biostars:

Only 1 of these is R, and it is not a Bioconductor package.

Kevin

ADD COMMENT

Login before adding your answer.

Traffic: 495 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6