I am reaching out for your advice. Would you please recommend tools preferably in Bioconductor for the following problem: I have a list of transcription factors. At first, I must find all the possible downstream gene targets, then retrieve all the possible interactions (edges) between those genes to build a regulatory network.
All the tools I found do the opposite: finding transcription factors for a list of genes.
Your help and advice are highly appreciated. Thank you in advance. Anita