Strange problem with parameter range when creating a flowFPModel
0
0
Entering edit mode
@palffykaroly-23035
Last seen 4.6 years ago

I created a flowFPModel from a flowSet using two logtransformed parameters. One of these parameters (FL3) was used for a rectangleGate to filter out background noise, thus, the original range of -1 to 3 was narrowed down to 0 to 3. When I make a plot of the resulting model or have a look at the bin boundaries, it shows that the model still spans the original range of -1 to 3. I do not know if this could affect the binning process, since there are obviously no events in the filtered flowFrames below 0 log(FL3). I suppose this has something to do with the keywords of the flowFrames, but I am not sure. I tried to change 'flowCore_$P5Rmin' (the minimum of FL3) among the keywords to zero, but that did not solve my problem. Any help or suggestion would be highly appreciated.

flowCore flowFP flowFPModel • 705 views
ADD COMMENT

Login before adding your answer.

Traffic: 753 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6