Program not properly installed/program not accessible by system
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hoonhuiyi • 0
@hoonhuiyi-23342
Last seen 14 months ago

How do I install a program properly ( Oligoarrayaux) such that a software(decipher using R) is able to access the program? Should I put the installed program in the same file folder etc?

> system("hybrid-min -V") 
[1] 127
> system("OligoArrayAux") 
[1] 127
> primers <- DesignPrimers(tiles, identifier="Accumulibacter",minCoverage=1, minGroupCoverage=1) 
Error in DesignPrimers(tiles, identifier = "Accumulibacter", minCoverage = 1, : OligoArrayAux must be properly installed.
R decipher • 403 views
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Erik Wright ▴ 150
@erik-wright-14386
Last seen 6 weeks ago
United States

OligoArrayAux needs to be installed in your system's PATH, which is platform dependent.

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thank you i have managed to installed it

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I am facing the same problem with the OligoArrayAux installation, but so far I could not manage to install it properly. I am using Windows 10 and even adapted the systems' Path to the OligoArrayAux location. Do you have any idea what might be wrong?

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Me too, I downloaded the OligoArrayAux from UNAFold web server (http://www.unafold.org/Dinamelt/software/oligoarrayaux.php), but still get the error message: "OligoArrayAux must be properly installed". Could you please help?

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If OligoArrayAux (or UNAFold) are properly installed, it should be possible within R to run: system("hybrid-min -h") without an error.

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