Showing : decipher • reset
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Issue::DesignPrimers DECIPHER
DECIPHER DesignPrimers
updated 4 months ago by • 0 • written 4 months ago by • 0
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1
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190
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ORF finding in DECIPHER
ORF DECIPHER ORFhunteR
updated 7 months ago by ▴ 150 • written 7 months ago by • 0
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5
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671
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Do DECIPHER:IdTaxa / dada2::assignTaxonomy work with ambigious reference training set?
decipher dada2
updated 7 months ago by ▴ 10 • written 23 months ago by • 0
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5
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385
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DECIPHER maximum allowable size
DECIPHER Alignment alig
updated 8 months ago by ▴ 150 • written 8 months ago by • 0
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DECIPHER Package on dada2 -Implementing Silva_metaxa2 training set from qza file into a fastq.gz/.Rdata
DECIPHER dada2
9 months ago anrongloh • 0
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1
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221
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Defining groups in Decipher by sequence position in the database (FASTA)
DefiningGroups RStudio DECIPHER Specificprimers
updated 11 months ago by ▴ 150 • written 11 months ago by • 0
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5
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679
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Program not properly installed/program not accessible by system
R decipher
updated 10 months ago by ▴ 150 • written 21 months ago by • 0
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209
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DECIPHER Probe Design Questions
DECIPHER
14 months ago henry1995910343 • 0
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2
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241
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insufficient alignment
DECIPHER Alignment
14 months ago julius_vn • 0
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3
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452
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DECIPHER save alignement in outputs
msa decipher output prettyPrint
updated 16 months ago by ▴ 290 • written 16 months ago by • 0
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6
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653
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Issue with DECIPHER::IdTaxa
DECIPHER IdTaxa
16 months ago sebastian.mynott • 0
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1
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218
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convert sequences disambiguated with DECIPHER back to FASTA
DECIPHER FASTA disambiguate
20 months ago joannew • 0
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2
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274
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how to design probes using decipher
R decipher
20 months ago hoonhuiyi • 0
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5
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1.1k
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Error in (function (classes, fdef, mtable)
software error DECIPHER
updated 21 months ago by 2.9k • written 21 months ago by • 0
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21
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899
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How to use DECIPHER to design group-specific primers
Decipher
21 months ago hoonhuiyi • 0
0
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1
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264
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DECIPHER::AlignSeqs fails with a large guide tree
DECIPHER
updated 2.0 years ago by ▴ 150 • written 2.0 years ago by ▴ 10
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1
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248
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PCR simulation with PNAs
PCR DECIPHER PNA
2.3 years ago marissaruthlee • 0
1
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2
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479
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Display BrowseSeqs output in R Notebook?
BrowseSeqs DECIPHER notebook rmarkdown
updated 2.4 years ago by ▴ 150 • written 2.4 years ago by • 0
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0
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250
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Alignment larger than the maximum allowable size
DECIPHER
updated 2.5 years ago by 2.9k • written 2.5 years ago by • 0
2
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4
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655
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How to get sequence homology percent from a multiple sequence alignment in DECIPHER?
decipher r protein alignment
3.7 years ago reubenmcgregor88 • 0
2
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2
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868
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How to combine sequences from different stringsets?
biostrings decipher
updated 4.0 years ago by ★ 5.3k • written 4.0 years ago by • 0
1
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3
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640
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Transform index to chromosome in DECIPHER package
decipher
updated 4.0 years ago by ▴ 150 • written 4.0 years ago by ▴ 40
5
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7
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765
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Is it possible to do an alignment to a chosen reference sequence in DECIPHER?
R decipher biostrings
updated 4.0 years ago by ▴ 150 • written 4.0 years ago by • 0
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2
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556
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Is it possible to import many .tsr sequence file into R using bio strings for use in DECIPHER?
r biostrings decipher
4.0 years ago reubenmcgregor88 • 0
2
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5
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806
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Colour a phylogenetic tree, based on column in DECIPHER?
r decipher biostrings
updated 4.1 years ago by ▴ 150 • written 4.1 years ago by • 0
2
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3
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908
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Is it possible to import a multiple fasta alignemnt (.mfa) file into DECIPHER?
decipher DNA biostrings
updated 4.1 years ago by ▴ 150 • written 4.1 years ago by • 0
0
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1
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679
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DECIPHER - AlignSeqs error is.leaf(dend) node stack overflow
decipher alignment
updated 4.3 years ago by ▴ 10 • written 4.3 years ago by • 0
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1
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991
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AlignSeqs error: protect(): protection stack overflow
multiplealignment decipher
4.3 years ago c.l.frankling • 0
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5
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1.0k
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Multiple Sequence Alignment using DNA sequence
msa decipher
4.7 years ago bbista91 ▴ 10
1
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5
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867
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DECIPHER version bug using biocLite()
DECIPHER
5.6 years ago Vinicius Henrique da Silva ▴ 40
0
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1
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605
views
Possible bug in ConsensusSequence
DECIPHER
updated 5.7 years ago by ▴ 10 • written 5.7 years ago by • 0
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3
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2.0k
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mt.teststat
multtest DECIPHER multtest DECIPHER
updated 6.0 years ago by ▴ 20 • written 18.8 years ago by ▴ 220
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1.1k
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Job: Bioinformatics Postdoc Position at the IMB, Mainz
Genetics DECIPHER Genetics DECIPHER
7.9 years ago Kathi Zarnack ▴ 110
0
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1
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694
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Agi4x44PreProcess: Replicated Genes and Custom Annotation Database
Annotation zebrafish probe DECIPHER Annotation zebrafish probe DECIPHER
updated 11.5 years ago by ★ 7.2k • written 11.5 years ago by ▴ 40
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1
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1.3k
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boxplot error with expression set using oligo package and Human gene st 1.0 arrays
oligo DECIPHER oligo DECIPHER
updated 11.6 years ago by ★ 4.3k • written 11.6 years ago by ▴ 30
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0
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746
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Basic Question about gcrma & exporting to excel > (command not working)
Microarray affy gcrma oligo arrayQualityMetrics DECIPHER Microarray affy gcrma oligo
11.6 years ago Dick Beyer ★ 1.4k
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'Heat Map for Genes in Dataset' in the '(project name).global.plots.pdf' output of the R-GSEA code
Genetics Clustering DECIPHER Genetics Clustering DECIPHER
11.8 years ago Radek Blatny ▴ 60
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1.2k
views
Post-doc position in Paris
Sequencing Epigenetics Cancer Breast DECIPHER Sequencing Epigenetics Cancer Breast
12.6 years ago Joern Toedling ▴ 450
0
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4
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796
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help with large Rgraphviz output
graph DECIPHER graph DECIPHER
updated 15.6 years ago by ★ 7.4k • written 15.6 years ago by ▴ 890
39 results • Page 1 of 1
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Comment: DiffBind dba.count Error in if (sum(tokeep) < length(tokeep)) by tjhwangxiong • 0
``` https://drive.google.com/drive/folders/1787thVatZpt_KFrfXY-aXV1m0FRm8Mhm?usp=sharing ``` Thanks for your reply. I have uploaded the fil…
Comment: Trying to follow a gene set analyisis in R by Michael Love 35k
No I can’t help with exercises. Just to be clear I’m not affiliated with Harvard and have no supported effort in relation to the edx classe…
Answer: Problems to find the pvalues via rowttests by Gordon Smyth 44k
Ordinary t-tests aren't recommended for genomic analyses because they have poor power and higher false discovery rates. Using the limma p…
Answer: How to insert a qvalues column in a dataframe with pvalues in R by Gordon Smyth 44k
Here and in a previous post, it seems you're not using recommended Bioconductor workflows for Affymetrix microarrays. If you used a standar…
Comment: Trying to follow a gene set analyisis in R by leonardorosas2001 • 0
Thank you. I hope I can still let you know if I have issues with your exercises. They are very challenging but useful! :)
Votes
Answer: Problems to find the pvalues via rowttests
A: How to use subSeq with DNAStringSet and information of GroupedIRanges?
A: How to use subSeq with DNAStringSet and information of GroupedIRanges?
Annotating GRanges with TxDb gene models using plyranges
plyranges select() when a metadata column is shared with core variable
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