Unable to load Rgaphviz
2
0
Entering edit mode
anupam sinha ▴ 270
@anupam-sinha-3207
Last seen 8.2 years ago
Hi, My heartiest greetings for Christmas and New Year to all of you. I am presently working on the evolutionary dynamics of Metabolic Interaction Networks(enzyme centric) for which I have installed R and subsequently Rgraphviz. But whenever I try to load Rgraphviz using the command 'library("Rgraphviz")' it gives the following error: library("Rgraphviz") Error in dyn.load(file, ...) : unable to load shared library '/home/anupam/R/i686-redhat-linux-gnu- library/2.6/Rgraphviz/libs/Rgraphviz.so': libgvc.so.4: cannot open shared object file: No such file or directory Error : .onLoad failed in 'loadNamespace' for 'Rgraphviz' Error: package/namespace load failed for 'Rgraphviz' Can anyone tell me whats happening??? Regards, Anupam Sinha [[alternative HTML version deleted]]
Rgraphviz Rgraphviz • 786 views
ADD COMMENT
0
Entering edit mode
@martin-morgan-1513
Last seen 7 days ago
United States
"anupam sinha" <anupam.contact at="" gmail.com=""> writes: > Hi, > My heartiest greetings for Christmas and New Year to all of you. I am > presently working on the evolutionary dynamics of Metabolic Interaction > Networks(enzyme centric) for which I have installed R and subsequently > Rgraphviz. But whenever I try to load Rgraphviz using the command > 'library("Rgraphviz")' it gives the following error: > > library("Rgraphviz") > Error in dyn.load(file, ...) : > unable to load shared library > '/home/anupam/R/i686-redhat-linux-gnu- library/2.6/Rgraphviz/libs/Rgraphviz.so': > libgvc.so.4: cannot open shared object file: No such file or directory > Error : .onLoad failed in 'loadNamespace' for 'Rgraphviz' > Error: package/namespace load failed for 'Rgraphviz' Likely graphviz (not Rgraphviz) has been installed in such a way that the graphviz libraries can not be found. A solution might be to set LD_LIBRARY_PATH or, better, to run ldconfig with appropriate arguments. Martin > Can anyone tell me whats happening??? > > > Regards, > Anupam Sinha > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor -- Martin Morgan Computational Biology / Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109 Location: Arnold Building M2 B169 Phone: (206) 667-2793
ADD COMMENT
0
Entering edit mode
ALok ▴ 170
@alok-2917
Last seen 8.2 years ago
Install R by using latest tar package, configure the file using ./configure --enable-R-shlib This allows to share objects. and then install RGraphviz ALok On Mon, Dec 29, 2008 at 11:20 PM, anupam sinha <anupam.contact@gmail.com>wrote: > Hi, > My heartiest greetings for Christmas and New Year to all of you. I am > presently working on the evolutionary dynamics of Metabolic Interaction > Networks(enzyme centric) for which I have installed R and subsequently > Rgraphviz. But whenever I try to load Rgraphviz using the command > 'library("Rgraphviz")' it gives the following error: > > library("Rgraphviz") > Error in dyn.load(file, ...) : > unable to load shared library > > '/home/anupam/R/i686-redhat-linux-gnu- library/2.6/Rgraphviz/libs/Rgraphviz.so': > libgvc.so.4: cannot open shared object file: No such file or directory > Error : .onLoad failed in 'loadNamespace' for 'Rgraphviz' > Error: package/namespace load failed for 'Rgraphviz' > > Can anyone tell me whats happening??? > > > Regards, > Anupam Sinha > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: > http://news.gmane.org/gmane.science.biology.informatics.conductor > -- Ph.D scholar Centre of Computational Biology and Bioinformatics School of Information Technology JNU New Delhi [[alternative HTML version deleted]]
ADD COMMENT

Login before adding your answer.

Traffic: 295 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6