And there is also a version of the package that is meant to be used in release right here (not sure which version of things you are using): http://www.bioconductor.org/packages/release/data/annotation/html/pd.m oex.1.0.st.v1.html Marc Marc Carlson wrote: > Hi Peng, > > It depends on what kind of annotation package you are looking for. If > you want the kind used by oligo, then you probably want > pd.moex.1.0.st.v1 mogene10stprobeset.db is more of a classic gene > centric "probes" style package... > > You can see pd.moex.1.0.st.v1 here: > > http://www.bioconductor.org/packages/devel/data/annotation/html/pd.m oex.1.0.st.v1.html > > > Marc > > > > > > Peng Yu wrote: > >> Hi, >> >> I am looking the annotation file for Affymetrix GeneChip? Mouse Exon >> 1.0 ST Array. >> >> I see the package mogene10stprobeset.db for GeneChip? Mouse Gene 1.0 >> ST Array. But I don't see the one for the Exon array. >> >> Regards, >> Peng >> >> On Thu, Aug 20, 2009 at 4:55 PM, Benilton Carvalho<bcarvalh at="" jhsph.edu=""> wrote: >> >> >>> you haven't described which exon array you want an annotation package for. >>> >>> but on this very same page you point us to you will find packages for: >>> >>> HuEx >>> RaEx >>> MoEx >>> >>> just search the page for these strings and you'll find the packages... >>> >>> but, again, remember that these will not give you summaries at the gene >>> level just yet. >>> >>> b >>> >>> On Aug 20, 2009, at 6:46 PM, Peng Yu wrote: >>> >>> >>> >>>> Hi, >>>> >>>> I only find annotation package for Gene arrays. But I don't find any >>>> package for Exon arrays. Can somebody let me know if there is some >>>> annotation for Exon arrays some where else? >>>> >>>> http://bioconductor.org/packages/release/data/annotation/ >>>> >>>> Regards, >>>> Peng >>>> >>>> _______________________________________________ >>>> Bioconductor mailing list >>>> Bioconductor at stat.math.ethz.ch >>>> https://stat.ethz.ch/mailman/listinfo/bioconductor >>>> Search the archives: >>>> http://news.gmane.org/gmane.science.biology.informatics.conductor >>>> >>>> >>> >>> >> _______________________________________________ >> Bioconductor mailing list >> Bioconductor at stat.math.ethz.ch >> https://stat.ethz.ch/mailman/listinfo/bioconductor >> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor >> >> >> > > _______________________________________________ > Bioconductor mailing list > Bioconductor at stat.math.ethz.ch > https://stat.ethz.ch/mailman/listinfo/bioconductor > Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor > >