I am using Raqua and BioC 1.3 and I have gotten an error while trying to perform GCRMA on several MOE430A chips: Error in getGroupInfo(object) : couldn't find function "complementSeq" I gathered that it's an internal function for bg.adjust.gcrma. Ideas? -Stuart-

complementSeq is an internal function of the package "matchprobes" and it is in any probepackage. When you call gcrma it should check if you have the appropriate probe package loaded, in your case it should give an error msg indicating "moe403aprobe" is not loaded (if yes the complementSeq function would be available). But if you call bg.adjust.gcrma directly it doesn't check for that. On Tue, 4 Nov 2003, Stuart M. Chambers wrote: > I am using Raqua and BioC 1.3 and I have gotten an error while trying to > perform > GCRMA on several MOE430A chips: > > Error in getGroupInfo(object) : couldn't find function "complementSeq" > > I gathered that it's an internal function for bg.adjust.gcrma. > > > Ideas? > > > -Stuart- > > _______________________________________________ > Bioconductor mailing list > Bioconductor@stat.math.ethz.ch > https://www.stat.math.ethz.ch/mailman/listinfo/bioconductor >