Hi everybody.
I have an old exprSet and AffyBatch (from 2006) I believe that I need
to read.
I tried updateObject and failed, I try to get the exprs as:
object at exprs and failed.
any other idea.....
Mayte Suarez-Farinas
Research Associate, The Rockefeller University
Biostatistician, The Rockefeller University Hospital
1230 York Ave, Box 178,
New York, NY, 10021
+1(212) 327-8213
Hi Mayte,
On 2/18/10 8:48 AM, Mayte Suarez-Farinas wrote:
> Hi everybody.
> I have an old exprSet and AffyBatch (from 2006) I believe that I
need to
> read.
> I tried updateObject and failed, I try to get the exprs as: object
at exprs
> and failed.
> any other idea.....
Could you please provide sessionInfo() and some detail of the error
message you are seeing?
+ seth
--
Seth Falcon
Bioconductor Core Team | FHCRC
On 02/19/2010 09:19 AM, Seth Falcon wrote:
> Hi Mayte,
>
> On 2/18/10 8:48 AM, Mayte Suarez-Farinas wrote:
>> Hi everybody.
>> I have an old exprSet and AffyBatch (from 2006) I believe that I
need to
>> read.
>> I tried updateObject and failed, I try to get the exprs as: object
at exprs
>> and failed.
>> any other idea.....
>
> Could you please provide sessionInfo() and some detail of the error
> message you are seeing?
In particular it's possible that there is a conflict between
Biobase::updateObject and IRanges::updateObject. If you have both
Biobase and IRanges attached, then be sure to use
Biobase::updateObject(exprSet)
Martin
>
> + seth
>
--
Martin Morgan
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109
Location: Arnold Building M1 B861
Phone: (206) 667-2793
