Reg: normalization of ArrayExpress data
2
0
Entering edit mode
Rohit Farmer ▴ 170
@rohit-farmer-3954
Last seen 9.7 years ago
Hi there ... i am new to Bioconductor and Microarray analysis ... i am working on a data with i downloaded from ArrayExpress using the ArrayExpress package and the object created is of NChannelset class now i wan to go for normalization ... but i don't how to proceed further ... please help me in this regard Thanks and regards Rohit -- Rohit Farmer M.Tech Bioinformatics Department of Computational Biology and Bioinformatics Jacob School of Biengineering and Biotechnology Sam Higginbottom Institute of Agriculture, Technology and Sciences (Formerly known as Allahabad Agricultural Institute - Deemed University) Allahabad, UP, INDIA - 211 007 Ph. No. 9839845093, 9415261403 e-Mail rohit.farmer at gmail.com Blog http://rohitsspace.blogspot.com
Microarray Normalization GO ArrayExpress Microarray Normalization GO ArrayExpress • 1.2k views
ADD COMMENT
0
Entering edit mode
Rohit Farmer ▴ 170
@rohit-farmer-3954
Last seen 9.7 years ago
Hi there ... i am new to Bioconductor and Microarray analysis ... i am working on a data with i downloaded from ArrayExpress using the ArrayExpress package and the object created is of NChannelset class now i wan to go for normalization ... but i don't how to proceed further ... please help me in this regard Thanks and regards Rohit -- Rohit Farmer M.Tech Bioinformatics Department of Computational Biology and Bioinformatics Jacob School of Biengineering and Biotechnology Sam Higginbottom Institute of Agriculture, Technology and Sciences (Formerly known as Allahabad Agricultural Institute - Deemed University) Allahabad, UP, INDIA - 211 007 Ph. No. 9839845093, 9415261403 e-Mail rohit.farmer at gmail.com Blog http://rohitsspace.blogspot.com
ADD COMMENT
0
Entering edit mode
Rohit Farmer ▴ 170
@rohit-farmer-3954
Last seen 9.7 years ago
Hi there ... i am new to Bioconductor and Microarray analysis ... i am working on a data with i downloaded from ArrayExpress using the ArrayExpress package and the object created is of NChannelset class now i wan to go for normalization ... but i don't how to proceed further ... please help me in this regard Thanks and regards -- Rohit Farmer M.Tech Bioinformatics Department of Computational Biology and Bioinformatics Jacob School of Biengineering and Biotechnology Sam Higginbottom Institute of Agriculture, Technology and Sciences (Formerly known as Allahabad Agricultural Institute - Deemed University) Allahabad, UP, INDIA - 211 007 Ph. No. 9839845093, 9415261403 e-Mail rohit.farmer at gmail.com Blog http://rohitsspace.blogspot.com
ADD COMMENT
0
Entering edit mode
Rohit Farmer scripsit 11/03/10 12:40: > Hi there ... i am new to Bioconductor and Microarray analysis ... i am > working on a data with i downloaded from ArrayExpress using the > ArrayExpress package and the object created is of NChannelset class > now i wan to go for normalization ... but i don't how to proceed > further ... please help me in this regard > > Thanks and regards > Dear Rohit regarding the content of your question, please consider the book http://www.bioconductor.org/pub/biocases/ esp. the chapter on two color array data. Best wishes Wolfgang PS regarding its style, please also consider https://stat.ethz.ch/pipermail/r-help/2005-April/068625.html :) -- Wolfgang Huber EMBL http://www.embl.de/research/units/genome_biology/huber/contact
ADD REPLY

Login before adding your answer.

Traffic: 834 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6