Hi, I am trying to install the package "hthgu133a.db", however there is a problem to load the package 'org.Hs.eg.db' and I don't know how to figure it out, here is the error information and the session infor. Hope some one can help~ > library('org.Hs.eg.db') Error in sqliteExecStatement(con, statement, bind.data) : RS-DBI driver: (error in statement: database is locked) Error : .onLoad failed in 'loadNamespace' for 'org.Hs.eg.db' Error: package/namespace load failed for 'org.Hs.eg.db' > sessionInfo() R version 2.10.1 (2009-12-14) x86_64-unknown-linux-gnu locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 [5] LC_MONETARY=C LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=en_US.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] RSQLite_0.8-4 DBI_0.2-5 annotate_1.24.1 [4] AnnotationDbi_1.8.2 e1071_1.5-23 class_7.3-1 [7] affy_1.24.2 Biobase_2.6.1 loaded via a namespace (and not attached): [1] affyio_1.14.0 preprocessCore_1.8.0 tools_2.10.1 [4] xtable_1.5-6 [[alternative HTML version deleted]]

On 4/19/10 2:30 AM, LiYun wrote: > Hi, > > I am trying to install the package "hthgu133a.db", however there is > a problem to load the package 'org.Hs.eg.db' and I don't know how to figure > it out, here is the error information and the session infor. > > Hope some one can help~ > >> library('org.Hs.eg.db') > > Error in sqliteExecStatement(con, statement, bind.data) : > > RS-DBI driver: (error in statement: database is locked) > > Error : .onLoad failed in 'loadNamespace' for 'org.Hs.eg.db' > > Error: package/namespace load failed for 'org.Hs.eg.db' Can you try starting a fresh R session, reinstalling the package using biocLite and then reporting back? + seth -- Seth Falcon Bioconductor Core Team | FHCRC